Streptomyces coelicolor: SCO1478
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Entry
SCO1478 CDS
T00085
Symbol
SC9C5.02c
Name
(GenBank) putative DNA-directed RNA polymerase omega chain
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sco
Streptomyces coelicolor
Pathway
sco03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCO1478 (SC9C5.02c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sco03021
]
SCO1478 (SC9C5.02c)
03400 DNA repair and recombination proteins [BR:
sco03400
]
SCO1478 (SC9C5.02c)
Enzymes [BR:
sco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SCO1478 (SC9C5.02c)
Transcription machinery [BR:
sco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCO1478 (SC9C5.02c)
DNA repair and recombination proteins [BR:
sco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCO1478 (SC9C5.02c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
CAB93358
Kitasato:
SCO1478
UniProt:
Q9KXS1
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(1580546..1580818)
Genome browser
AA seq
90 aa
AA seq
DB search
MSSSISAPEGIINPPIDELLEATDSKYSLVIYAAKRARQINAYYSQLGEGLLEYVGPLVD
THVHEKPLSIALREINAGLLTSEAIEGPAQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcttccatctccgcgcccgagggcatcatcaacccgccgatcgacgagctcctc
gaggccacggactcgaagtacagcctcgtgatctacgcggccaagcgggcccgccagatc
aatgcgtactactcgcagctcggcgagggcctcctcgagtacgtcggtccgctcgtcgac
acccacgtgcacgagaagccgctctcgatcgccctgcgcgagatcaacgcggggctgctg
acctccgaggccatcgagggcccggcgcagtag
DBGET
integrated database retrieval system
