Streptomyces coelicolor: SCO2003
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Entry
SCO2003 CDS
T00085
Symbol
SC7H2.17c
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sco
Streptomyces coelicolor
Pathway
sco03030
DNA replication
sco03410
Base excision repair
sco03420
Nucleotide excision repair
sco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCO2003 (SC7H2.17c)
03410 Base excision repair
SCO2003 (SC7H2.17c)
03420 Nucleotide excision repair
SCO2003 (SC7H2.17c)
03440 Homologous recombination
SCO2003 (SC7H2.17c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sco03032
]
SCO2003 (SC7H2.17c)
03400 DNA repair and recombination proteins [BR:
sco03400
]
SCO2003 (SC7H2.17c)
Enzymes [BR:
sco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCO2003 (SC7H2.17c)
DNA replication proteins [BR:
sco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SCO2003 (SC7H2.17c)
DNA repair and recombination proteins [BR:
sco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SCO2003 (SC7H2.17c)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCO2003 (SC7H2.17c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
CAB52059
Kitasato:
SCO2003
UniProt:
Q9S2K0
LinkDB
All DBs
Position
complement(2141659..2144382)
Genome browser
AA seq
907 aa
AA seq
DB search
MAKTASKKTDSTSGGRPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLAN
TLRDEAPTHFAVAFDVSRKTWRSEEFTEYKANRSKTPDEFKGQVELIGELLDSMHVPRFA
VEGFEADDVIATLATEAEAEGFDVLIVTGDRDSFQLVSEHTTVLYPTKGVSELTRFTPEK
VFEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELVERVDEVKGK
AGQNLRDHLESVKLNRRLTELERRVELPRTVTDLERTAYDRKGVAVILDTLEIRNPSLRE
RLYAVDPGAEEAEATPVVADGVELDGTVLGTGELAGWLAEHGAQPLGVATVDTWALGTGS
VTEVALAASDGKAAWFDPTELDEADETAFRSWLSDPDRPKVFHNAKGAMRVLAEHGWSVA
GVGMDTALAAYLVKPGRRSFDLDALSLEYLHRELAPAAAADGQLAFGADEGAEAEVLMVQ
ARAILDLGETFESRLADVGAADLLRDMELPTSALLARMERHGIAADREHLQAMEQMFAGA
VQQAVKEAHAAAGREFNLGSPKQLQEVLFGELNLPKTKKTKTGYTTDADALAWLAAQTDN
ELPVIMLRHREQAKLRVTVEGLIKTIAADGRIHTTFNQTVAATGRLSSTDPNLQNIPVRT
DEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDAGLTEAFTSGEDLHTTAAAQVF
SVEQSAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIEAAEARGLMDAYFERFGGVRDYL
RRVVDEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAMLN
VDKALREADLKSRMLLQVHDEIVLEIAPGERAAAEELVRREMANAVQLRVPLGVSVGAGP
DWESAAH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagacagcatcgaagaagaccgacagcacctccggcggccgaccgcggctgatg
ctcatggacgggcactcgctggcgtaccgcgcgttcttcgcgctgcccgcggagaacttc
acgaccgcgacgggccagccgaccaacgcgatctacgggttcgcgtcgatgctggccaac
accctgcgtgacgaggcgcccacgcacttcgcggtggcgttcgacgtctcccgcaagacc
tggcgctccgaggagttcaccgagtacaaggcgaaccgctccaagaccccggacgagttc
aaggggcaggtggagctgatcggtgagctgctcgactccatgcacgtgccccggttcgcc
gtcgagggcttcgaggcggacgacgtcatcgccaccctcgccaccgaggccgaggccgag
ggcttcgacgtcctgatcgtcaccggcgaccgggactccttccagctggtcagcgagcac
accacggtcctctatccgaccaagggcgtctccgagctgacccgcttcaccccggagaag
gtcttcgagaagtacgggctcacccccgcccagtaccccgacttcgcggcgctgcgcggc
gacccgtccgacaacctgccgggcatcccgggcgtcggcgagaagaccgccgcgaagtgg
atcaaccagttcggatcgttcgcggagctggtcgagcgcgtcgacgaggtcaagggcaag
gccgggcagaacctgcgcgaccacctggagtccgtgaagctcaaccgccggctcaccgag
ctggagcggcgggtcgagctgccgaggaccgtcaccgacctggagcggacggcgtacgac
cgcaagggcgtcgcggtgatcctggacaccctggagatccgcaatccttcgctgcgcgag
cggctctacgccgtcgacccgggcgccgaggaggccgaggccaccccggtggtcgcggac
ggcgtggaactggacggcaccgtgctgggcacgggcgagctggccggctggctcgccgag
cacggtgcgcagccgctcggcgtggccaccgtcgacacctgggccctgggcaccggatcg
gtgaccgaggtcgcgctcgccgcgtccgacgggaaggccgcctggttcgacccgacggag
ctcgacgaggccgacgagacggcgttccgctcctggctctccgacccggaccggccgaag
gtcttccacaacgccaagggcgcgatgcgcgtcctcgccgagcacggctggagcgtcgcc
ggggtgggcatggacaccgccctggccgcctacctggtcaagccgggccggcgctccttc
gacctggacgcgctgtccctggagtacctgcaccgcgagctggcccccgccgccgcggcc
gacggacagctcgccttcggcgcggacgagggcgccgaggccgaggtgctgatggtgcag
gcccgcgccatcctcgacctgggcgagaccttcgagagccgcctggccgacgtcggcgcc
gccgacctgctgcgcgacatggagctgcccacgtccgcgctgctcgcccgcatggagcgg
cacggcatcgcggccgaccgggagcacctccaggccatggagcagatgttcgcgggcgcc
gtccagcaggcggtcaaggaggcccacgcggcggccggacgcgagttcaacctgggctcg
cccaagcagctccaggaagtcctcttcggcgagctgaacctgccgaagaccaagaagacc
aagaccggctacaccaccgacgccgacgccctggcctggctcgccgcccagacggacaac
gagctgccggtgatcatgctccgccaccgcgagcaggccaagctgcgcgtcacggtggag
ggcctgatcaagacgatcgccgcggacggccgcatccacaccacgttcaaccagacggtc
gccgcgaccggccgcctctcgtccacggacccgaacctgcagaacatcccggtccgcacc
gacgagggccgcgccatccgccgcggcttcgtggtcggcgagggattcgagtccctgatg
acggccgactacagccagatcgaactgcgcgtgatggcccacctctccgaggacgcgggc
ctgaccgaggcgttcacgtccggcgaggacctgcacaccaccgccgccgcccaggtcttc
tccgtcgagcagtcggccgtggacgcggagatgcgccgcaagatcaaggccatgtcctac
ggactcgcgtacgggctctccgccttcggcctctcccagcagctgaacatcgaggcggcc
gaggcacgcggcctgatggacgcctacttcgagcgcttcggcggcgttcgcgactatctg
cgccgggtcgtcgacgaggcacgggccacgggatacacggcgaccctcttcggccgccgc
cgctacctccccgacctcaacagcgacaaccgccagcgccgcgaggcggccgagcggatg
gccctgaacgcgccgatccagggcacggcggccgacatcgtcaagatcgccatgctcaac
gtggacaaggcgctgcgcgaggccgacctcaagtcccgcatgctcctccaggtccacgac
gaaatcgtcctggagatcgctccgggcgagcgggccgcggcggaggagctggtccgccgc
gaaatggccaacgcggtgcagctcagggtccccctgggcgtctccgtgggcgcgggcccg
gactgggaatcggcagcgcactag
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