Streptomyces coelicolor: SCO2064
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Entry
SCO2064 CDS
T00085
Symbol
SC4G6.33c
Name
(GenBank) DNA polymerase III alpha chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sco
Streptomyces coelicolor
Pathway
sco03030
DNA replication
sco03430
Mismatch repair
sco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCO2064 (SC4G6.33c)
03430 Mismatch repair
SCO2064 (SC4G6.33c)
03440 Homologous recombination
SCO2064 (SC4G6.33c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sco03032
]
SCO2064 (SC4G6.33c)
03400 DNA repair and recombination proteins [BR:
sco03400
]
SCO2064 (SC4G6.33c)
Enzymes [BR:
sco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCO2064 (SC4G6.33c)
DNA replication proteins [BR:
sco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCO2064 (SC4G6.33c)
DNA repair and recombination proteins [BR:
sco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCO2064 (SC4G6.33c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAB51456
Kitasato:
SCO2064
UniProt:
Q9Z618
LinkDB
All DBs
Position
complement(2211637..2215176)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFDACNEMGMSHIAMSDHGNLHGAYDFFHSAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTMWATNSKGLHNLFRL
SSDAYAEGWLQKWPRMDKETISQWSEGIVASTGCPSGEVQTRLRLGHFDEALKAAADYQD
IFGKDRYFLELMDHGIEIEHRVRDGLLEIGRKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSDAWQEGCANTRLIAEMIDTTGMFEKRD
LMPKFDIPEGFTEITWFQEEVRRGMERRFPGGVPEDRQKQAEYEMDVIIQMGFPGYFLVV
ADFIMWAKNQGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPTHPRYSEAGEIRSMYESEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVKS
NKGIDLDLLSLPLDDPTTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMDSHTNYALRKNGLQEITPIHKELEEPLQEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPDELAKNFVLFQAGARKNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTGYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
MSNFAAQGDDVILFGLSAVRNVGTNVVESIIKCRKAKGKYASFPDYLDKVEAVVCNKRTT
ESLIKAGAFDEMGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGDEQSDEPGFGL
DVVFGEDEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGISQLTGGDFGDGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSLECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELMIPDLSNAGTNAPVVLTIPATRITPPMVSRLGEILTHHRGDSEVRI
KLQGPTKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcgacgcgtgcaacgagatgggcatgtcgcacatcgcc
atgtccgaccacggcaacctgcacggggcgtacgacttcttccactccgcgaagaaggcc
ggagtcaccccgatcatcgggatcgaggcgtacgtcgcccccgagtcccggcgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgggacgacgtctcgggttcgggcggt
tacacccacaagaccatgtgggcgacgaacagcaagggcctgcacaacctcttccggctc
tcctccgacgcctacgccgagggctggctgcagaagtggccgcggatggacaaggagacc
atcagccagtggtccgagggcatcgtcgcctccaccggctgcccctccggcgaggtgcag
acccggctgcgcctcggccacttcgacgaggccctgaaggccgccgccgactaccaggac
atcttcggcaaggaccgttacttcctggagctgatggaccacggcatcgagatcgagcac
cgggtccgcgacggactcctggagatcggcaggaagctcggcatcccgccgctggtgacg
aacgactcgcactacacctacgcgcacgaggcgaccgcccacgacgccctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttccgcttcgacggcaccggctactac
ctgaagtcgacggacgagatgtacgccatcgactcctccgacgcctggcaggagggctgc
gccaacacgcgcctgatcgccgagatgatcgacaccaccggcatgttcgagaagcgcgac
ctcatgccgaagttcgacatccccgagggcttcacggagatcacctggttccaggaggag
gtccgccgcggcatggagcgccgcttcccgggcggcgtccccgaggaccgccagaagcag
gccgagtacgagatggacgtcatcatccagatggggttcccggggtacttcctggtggtc
gccgacttcatcatgtgggccaagaaccagggcatcgcggtcggccccggccgaggctcc
gcggccggctcgatcgtggcctacgcgatgggcatcaccgacctcgaccccatcccgcac
ggcctgatcttcgagcgcttcctgaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatcaggtacgtgaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggggaccggctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcaccgacccgacgcacccgcgc
tacagcgaggccggcgagatccgctcgatgtacgagagcgagccggacgtcaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcacgcggccggc
gtgatcatgtccagcgagcccatcgtcgaccacgccccgatctgggtccggcacacggac
ggcgtgaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaagtcc
aacaagggcatcgacctcgacctgctgtcgctgccgctggacgaccccacgaccttcgaa
ctgctccagcgcggcgacacgctcggcgtcttccagttcgacggcggcccgatgcgctcc
ctgctgcggctgatgaagcccgacaacttcgaggacatctccgccgtctccgcgctctac
cgccccggcccgatgggcatggactcgcacaccaactacgcgctgcgcaagaacggcctc
caggagatcacgccgatccacaaggagctggaggagcccctccaggaggtcctcgcggtc
acctacggcctgatcgtctatcaggagcaggtgcagaaggccgcccagatcatcgcgggc
tactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgacgaa
ctggcgaagaacttcgtcctcttccaggccggagccaggaagaacggctacagcgacgag
gccatccaggccctgtgggacgtcctggtcccgttcgccggctacgccttcaacaaggcg
cactcggccgcctacggcctggtctcgtactggaccggatacctgaaggcgaactacccg
gccgagtacatggccgccctgctcacctcggtcaaggacgacaaggacaagtcggccgtc
tacctgaacgagtgccggcgcatgggcatcaaggtgctgccgcccaacgtcaacgagtcc
atgtcgaacttcgccgcgcagggcgacgacgtgatcctcttcggcctctccgccgtgcgc
aacgtcggcaccaacgtcgtcgagtcgatcatcaagtgccgcaaggccaaggggaagtac
gcgtccttccccgactacctggacaaggtggaggcggtcgtctgcaacaagcggacgacg
gagtcgctgatcaaggcgggcgccttcgacgagatggggcacacccgcaagggcctcacc
gcgcagtacgaaccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcggcatgggcgacgagcagagcgacgagcccggcttcggactc
gacgtggtcttcggcgaggacgagtgggacaagacctatctgctcgcccaggagcgggag
atgctcggtctctacgtctccgaccacccgctcttcggcctggagcacgtgctgtccgac
aaggccgacgcgggcatctcccagctcaccggcggtgacttcggcgacggcgcggtcgtc
accatcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaacgcctgg
gccatcgccaccgtcgaggacctggccggctcgctggagtgcatgttcttcccggcgacg
taccagctggtgtccacgcaactggtcgaggacgccgtggtgttcgtcaaggggcgcctc
gacaagcgggaggacgtgccccggctggtcgcgatggagctgatgattcccgacctgtcc
aacgcgggcaccaacgcccccgtcgtcctcaccatcccggcgacccgcatcacgccgccg
atggtcagcaggctcggtgagatcctcacccaccaccggggcgacagcgaggtgcggatc
aagctccaggggcccacgaagacgacggtgctgcgcctggaccggcaccgggtgaagccc
gatccggcgctgttcggcgacctgaaggtgctgctcgggccgtcctgcctggccggctga
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integrated database retrieval system
