Streptomyces coelicolor: SCO2821
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Entry
SCO2821 CDS
T00085
Symbol
SCBAC17F8.12c
Name
(GenBank) putative secreted pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sco
Streptomyces coelicolor
Pathway
sco00040
Pentose and glucuronate interconversions
sco01100
Metabolic pathways
sco02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SCO2821 (SCBAC17F8.12c)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCO2821 (SCBAC17F8.12c)
Enzymes [BR:
sco01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SCO2821 (SCBAC17F8.12c)
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
CAC44284
Kitasato:
SCO2821
UniProt:
Q93J76
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All DBs
Position
complement(3080444..3082009)
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AA seq
521 aa
AA seq
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MRRPVALRLQAALGTLALAAAAGVVLTMPEAAAAAGGATGYATQNGGTTGGAGGQTVRAT
TGTAIHEALCGRADSSTPITIEVEGTINHGNTSKVSGDSCNTAADRIELKQVSNITIVGV
GNGAVFDQLGIHIRESSNIIIQNVTVRNVKKSGSPTSNGGDAIGMESDVRNVWVDHSTLE
ASGGESEGYDGLFDMKDNTQYVTLSYSVLRNSGRGGLIGSSESDTSNGYVTFHHNLYENI
DSRAPLLRGGTAHMYNNHYVSLNKSGINSRAGAKAKVDNNYFEDSKDVLGTFYTDAAGFW
QVSGNIFDNVTWSEPGGDNNPAGPDPQSNTTVSIPYSYGLDDASCVPSVVSGTAGANKGL
KVSDGSCTPQSPDPTDPTDPDPTDPDPTDPTDPDPTDPPSGTNLSVGAGSDGSSKASGTS
YGNVRDGDLGTYWSPAGTTGSISVKWSSATTVGKINIREAAGSEGTVGSYRVVNHDTGAV
LASGSGAGVIGFSPVSLEKITFEITGASGTPKIAEFETYAG
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaccagtcgcgctgcgactccaagcggcactgggcacactggccctcgcggcc
gcggccggtgtggtgctgacgatgcccgaggcggcggcagcggccggcggcgccaccggc
tacgcgacccagaacggcggcacgaccggcggcgcgggcgggcagaccgtccgggccacc
accggcaccgcgatccacgaggccctgtgcggccgggccgacagcagcaccccgatcacc
atcgaggtcgagggcaccatcaaccacggcaacaccagcaaggtgtcgggcgacagctgc
aacaccgcggccgacaggatcgagctgaagcaggtcagcaacatcacgatcgtcggggtc
gggaacggcgccgtcttcgaccagctgggcatccacatccgggagtccagcaacatcatc
atccagaacgtgaccgtccggaacgtcaagaagtccggctcgcccacgtccaacggcggc
gacgccatcggcatggagagcgacgtccgcaacgtctgggtcgaccactccaccctggag
gcctccggcggggagtcggagggctacgacggcctcttcgacatgaaggacaacacccag
tacgtcaccctgtcctacagcgtcctgcgcaactccggccggggcgggctgatcgggtcc
agcgagagcgacacctcgaacgggtacgtcaccttccaccacaacctgtacgagaacatc
gactcccgcgcacccctgctgcgcggcggcacggcccacatgtacaacaaccactacgtg
agcctgaacaagtcgggcatcaactcccgcgccggcgccaaggccaaggtcgacaacaac
tacttcgaggactccaaggacgtcctcggcaccttctacaccgacgcggccggcttctgg
caggtcagcggcaacatcttcgacaacgtgacctggtccgagcccggcggggacaacaac
ccggccggccccgacccgcagtccaacaccacggtgtccatcccgtactcctacggcctc
gacgacgcctcctgcgtgccgtccgtggtgagcggcacggcgggcgcgaacaagggcctg
aaggtctcggacggcagctgcaccccgcagagcccggacccgaccgaccccaccgacccg
gacccgaccgacccggacccgacggatccgaccgacccggacccgaccgacccgccgagc
gggaccaacctgagcgtcggggcgggctccgacggctcgtccaaggcgagcggcaccagc
tacggcaacgtgcgcgacggcgacctcggcacgtactggtccccggccggcacgaccggc
tccatctccgtgaagtggtcctccgccaccaccgtcggcaagatcaacatccgtgaggcg
gcgggctccgagggcaccgtcggctcctaccgcgtcgtcaaccacgacaccggcgccgtc
ctggcctccggcagcggggcgggcgtgatcggcttctccccggtctcgctggagaagatc
accttcgagatcaccggcgcctccggcaccccgaagatcgccgagttcgagacgtacgcg
ggctga
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