Streptomyces coelicolor: SCO3896
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Entry
SCO3896 CDS
T00085
Symbol
SCH24.18
Name
(GenBank) putative RNA nucleotidyltransferase
KO
K00974
tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:
2.7.7.72
3.1.3.- 3.1.4.-]
Organism
sco
Streptomyces coelicolor
Pathway
sco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCO3896 (SCH24.18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sco03016
]
SCO3896 (SCH24.18)
Enzymes [BR:
sco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.72 CCA tRNA nucleotidyltransferase
SCO3896 (SCH24.18)
Transfer RNA biogenesis [BR:
sco03016
]
Eukaryotic type
3'processing and CCA adding factors
CCA adding factors
SCO3896 (SCH24.18)
Prokaryotic type
SCO3896 (SCH24.18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Bap31_Bap29_C
Motif
Other DBs
NCBI-ProteinID:
CAB42723
Kitasato:
SCO3896
UniProt:
Q9X8T2
LinkDB
All DBs
Position
4290216..4291667
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AA seq
483 aa
AA seq
DB search
MPNANEVSPSVLSQEQHRAAREPLRVAPVADDLARRFQEAGFSLALVGGSVRDALLGRLG
NDLDFTTDARPQDVLKIMRPWADAVWEVGIAFGTVGGQKDGWQIEVTTYRSEAYDRTSRK
PEVSYGDSIEEDLVRRDFTVNAMAVALPEKVFIDPHGGLDDLAARVLRTPGTPEDSFSDD
PLRMMRAARFAAQLDFEVAPEVVKAMHDMAGRIDIVSAERVRDELNKLILSPHPRKGLSL
LVETGLAERVLPELPALRLERDEHHRHKDVYDHTLIVLEQAMALESEGPDLTLRLAALLH
DIGKPRTRRFEKDGRVSFHHHEVVGAKMTKKRMIALKYSNDLVRDVSRLVELHLRFHGYG
TGEWTDSAVRRYVRDAGPLLDRLHKLTRSDCTTRNKRKASALSRAYDGLEDRIAQLQEQE
ELDAIRPDLDGNQIMEVLGVRPGPAVGQAYKHLLELRLENGPMEHDAAVAALKEWWAQHP
DNA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacgccaacgaagtcagccccagtgtcctgagccaggagcagcaccgcgcggcg
cgtgagccgctgcgggtcgcccccgtcgccgacgatctcgcccgccgtttccaggaggcc
gggttctcactcgcgctggtcggcggctcggtccgggacgccctgctcgggcggctcggc
aacgatctggacttcaccaccgacgcccgcccccaggacgttctgaagatcatgcgtccc
tgggcggacgcggtctgggaggtcgggatcgccttcggcacggtcggggggcagaaggac
ggctggcagatcgaggtgaccacctaccgctcggaggcgtacgaccgcacctcgcgcaag
cccgaggtgtcctacggcgactccatcgaggaggatctcgtccggcgtgacttcacggtg
aacgcgatggccgtcgcgcttccggagaaggtgttcatcgacccgcacggcggactcgac
gacctcgcggcccgtgtgctgcgcactccgggtacccccgaggactccttctcggacgac
ccgctgaggatgatgcgggccgcgcgcttcgccgcgcagctcgacttcgaggtggcgccg
gaggtggtcaaggccatgcacgacatggccgggcgcatcgacatcgtttccgcggagcgg
gtccgggacgagctgaacaagctcatcctctctcctcacccgcgcaagggactgagcctg
ctggtggagacgggtctagccgagcgggtcctgcccgagctgccggccctgcggctggag
cgtgacgagcaccaccggcacaaggacgtctacgaccacaccctcatcgtcctggagcag
gcgatggccctggagagcgaaggaccggacctgacccttcgtctggccgccctgctgcac
gacatcggcaagccccgcacccgccgcttcgagaaggacggcagggtctcgttccatcac
cacgaggtggtcggggccaagatgacgaagaagcgcatgatcgcgctcaagtactccaac
gacctggtgagggacgtctcacgcctggtcgagctgcatctgcgcttccatggctacggc
acgggcgagtggacggactccgcggtccgccgctacgtccgggacgccgggccgctgctc
gaccgacttcacaaactgacgcggtcggactgcacgacgcgcaacaaacgcaaggcttcg
gccctctcccgtgcgtacgacggtctggaggatcggatcgcgcagcttcaggagcaggag
gagctcgacgcgatccgcccggacctcgacggcaaccagatcatggaggtcctcggtgtt
cgtcctgggccggccgtcgggcaggcatacaagcacctgctggagcttcgcctggagaac
gggccgatggagcacgacgcggcggtggcagcactgaaggaatggtgggctcagcacccg
gacaacgcatga
DBGET
integrated database retrieval system
