Streptomyces coelicolor: SCO3947
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Entry
SCO3947 CDS
T00085
Symbol
SCD78.14
Name
(GenBank) putative ABC transporter
KO
K16014
ATP-binding cassette, subfamily C, bacterial CydCD
Organism
sco
Streptomyces coelicolor
Pathway
sco02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCO3947 (SCD78.14)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sco02000
]
SCO3947 (SCD78.14)
Transporters [BR:
sco02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SCO3947 (SCD78.14)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_29
AAA_16
AAA_22
RsgA_GTPase
AAA_33
MMR_HSR1
TsaE
AAA_18
AAA_25
AAA_23
nSTAND1
nSTAND3
NACHT
AAA_7
Mg_chelatase
AAA_30
AAA_24
AAA_28
Guanylate_kin
AAA_5
NB-ARC
MobB
Dynamin_N
APS_kinase
ATP-synt_ab
AAA
ATP_bind_1
DUF87
SRP54
DEAD
Motif
Other DBs
NCBI-ProteinID:
CAA22219
Kitasato:
SCO3947
UniProt:
Q9ZBY5
LinkDB
All DBs
Position
4343538..4347056
Genome browser
AA seq
1172 aa
AA seq
DB search
MKPIDPRLLRYARATRLFLAAVVALGAVGAGLLVAQAMLIAEVVVGAFQHGTTAVGLRTP
LLLLVAVACGRALVGWLTELAAHRASAAVKSELRGRLLERATALGPGWLGGQRTGSLVAL
ATRGVDALDDYFSRYLPQLGLAVVVPVAVLARIVTEDWVSAAIIVGTLPLIPVFMMLIGW
ATQSRMDRQWRLLSRLSGHFLDVVAGLPTLKVFGRAKAQAESIKRITGEYRQATMRTLRI
AFLSSFALELLATLSVALVAVTIGMRLVHGDMALYDGLVVLVLAPEAYLPLRQVGAQYHA
AAEGLAAAEDIFSVLERPVPASGTGPVPADHALRFEGVTVRYPGRAEAAVTNVDFTVEPG
ETVALVGPSGAGKSTLLNALLGFVPPTGGRVRVGGADLASLDVAQWHARVAWVPQHPHLY
AGTIAENVRLARPDADDTAVRRALRDAGALEFVDALPEGTATVLGEDGTGLSAGQRQRLA
LARAFLADRPVLLLDEPTAALDGATEAEVVDAVRRLAQGRTVLLVVHRPALLEVADRVVR
LDAPAGFGRAEDTSGSPVAAQDGPRTAAPGPFDEPVTASVEPAEPAAKARGGVLSRVRAM
SGARRGRLGLALLLSSLALGSAVGLMATSGYLISRASEQPPVLYLMVAVTATRAFGIGRA
VFRYAERLVSHDAVLRMLADTRVAVYRRLERLAPAGLRHSRRGDLLSRLVADVDALQDYW
LRWLLPAGSALVVSVASVGFTAWLLPEAGVVLAVGLLAAGVGVPLLTAAVARRAERRLAP
ARGVLATRVTELLTGTAELTVAGALPGRAAGARRADGTLTRIASRAATATALGDGLTALV
SGLTVAGAALVGVQAVADGRLAGVAVAVVVLTPLAAFEAVLGLPLAVQYRQRVRRSAERV
YEVLDAPEPVREPEVPRQAPATPFPVVVEGLAARHPGQDRDALAGLDLTLEQGRRVAVVG
PSGSGKTTLAQVLLRFLDSAAGSYTLAGVDAYALAGDDVRRLVGLCAQDAHLFDSSVREN
LLLARKDATEAELRDALARARLLEWADRLPDGLDTLVGEHGARLSGGQRQRLALARALLA
DFPVLVLDEPAEHLDLPTADALTADLLAATEGRTSLLITHRLAGLRAVDEVIVLDRGRVV
QRGTYAELAAVPGPLREMAGREAAAELLVGAV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacccatcgatccacgtcttctgcggtacgcccgcgccaccaggctcttcctggcg
gcggtcgtcgccctgggtgccgtcggggccggactgctcgtcgcccaggccatgctcatc
gccgaggtggtggtcggcgccttccagcacggcacgacggccgtcggactccgcacccct
ctactgctgttggtggccgtcgcctgcggccgggcgctggtcggctggctcaccgaactg
gccgcgcaccgcgcgagcgcggcggtgaagtccgagctgcggggccggctgctggagcgg
gccaccgcgctcggccccgggtggctgggcggacagcggaccggctccctggtcgccctc
gccacccggggcgtcgacgccctcgacgactatttctcgcgctatctgccgcaactgggc
ctcgcggtggtcgtgcccgtggcggtgctggcccgcatcgtgaccgaggactgggtctcg
gcggccatcatcgtcggcaccctgcccctcatcccggtgttcatgatgctgatcggctgg
gccacccagtcccggatggaccgccagtggcggctgctgtcgcggctgtcgggacacttc
ctggacgtggtcgcggggctgcccacgctgaaggtcttcggccgggccaaggcgcaggcc
gagtcgatcaagcgcatcaccggcgagtaccgccaggcgaccatgcggaccctgcggatc
gccttcctgtcgtccttcgcgctggaactgctcgccacgctgtccgtcgcgctggtcgct
gtcaccatcggcatgcgcctggtccacggggacatggcgttgtacgacggcctggtcgtg
ctcgtcctcgcgccggaggcctatctgccgctgcggcaggtgggggcgcagtaccacgcg
gcggccgagggcctcgccgccgccgaggacatcttctcggtgctggagcgtccggtaccg
gcgtcggggaccggaccggttccggcggaccatgcgctgcgcttcgagggcgtgacggtc
cgctacccaggacgtgccgaggcggccgtcacgaacgtggacttcaccgtcgagcccggg
gagacggtcgcgctcgtcggtcccagtggagcgggcaagtcgacgctgctgaacgccctg
ctcggcttcgttcccccgaccggggggcgggtccgggtcgggggagccgacctcgcctcg
ctcgatgtcgcgcagtggcacgcccgcgtcgcctgggtgccccagcatccgcacctgtac
gccggcaccatcgcggagaacgtacggctggcccggcccgacgccgacgacaccgccgtc
cgccgggccctgcgggacgcgggcgccctggagttcgtggacgcgctgcccgagggcacg
gcgaccgttctcggggaggacggaaccggcctgtccgcgggacagcggcagcggctggcg
ctggcccgggcgtttctcgcggaccggccggtgctgctgctcgacgagccgacggcggcc
ctggacggagccaccgaggcggaggtcgtggacgccgttcgcaggctggcgcaggggcgt
acggtcctgctggtggtgcaccgtccggcgctgctggaggtcgccgaccgggtggtgcgg
ctggacgctccggcgggcttcggccgggccgaggacaccagcgggtcgccggtcgccgcg
caggacggcccgcgcaccgccgctccgggtcccttcgacgagccggtcaccgcgtccgtc
gagcccgctgagcccgcagcgaaggcgcggggaggcgtgctgtcccgggtccgcgccatg
tccggcgcccggcgcggacggctcggcctcgcgctgctgctcagcagtctggcgctcggc
agcgccgtcggcctgatggcgacctccgggtacctcatctcccgggcttccgagcagccg
ccggtgctgtacctgatggtggccgtgacggcgacccgggccttcggcatcgggcgggcc
gtgttccgctacgcggagcggctggtgtcgcacgacgccgtgctgcggatgctggccgac
acgcgggtcgccgtgtaccggcggctggagcggctggccccggccgggctgcggcacagc
cgccggggcgacctgctgtcccggctcgtcgccgacgtcgacgccttgcaggactactgg
ctgcgctggctgctgcccgccggaagcgcactggtcgtctccgtcgcctcggtcgggttc
acggcctggctgctgccggaggcgggcgtcgtgctcgcggtcggcctgctcgcggccggt
gtcggtgttccgctgctcaccgcggccgtggcccggcgtgcggagcgccggctggccccc
gccaggggtgtgctcgccacccgggtgacggagctgctcaccggtaccgccgagctgacc
gtcgccggtgctctgcccggtcgcgccgccggggcccggcgggccgacggcactctcacc
cggatcgcctcgcgcgccgccacggccaccgcgctgggcgacgggctcaccgccctggtc
tccggcctgaccgtcgcgggcgccgccctcgtcggagtccaggcggtcgccgacggccga
ctcgccggcgtggccgtggccgtcgtcgtcctgaccccgctggccgccttcgaggccgtc
ctcggactgccgctcgccgtgcagtaccgccagcgcgtgcgcaggagcgccgagcgcgtg
tacgaggtgctcgacgcgccggagcccgtgcgggagcctgaggtgccgaggcaggcgccc
gccacgccgttcccggtggtcgtcgaagggctggccgcgcgtcaccccggacaggacagg
gacgcgctggcggggctggacctgaccttggaacagggacgccgcgtcgccgtggtcgga
ccgtccgggtccggcaagacgaccctcgcccaggtgctgctgcgcttcctcgactcggcg
gcgggctcctacacgctggccggtgtcgacgcctacgccctggccggcgacgacgtacgg
cgcctcgtcggactgtgcgcccaggacgcgcacctcttcgacagctcggtccgcgagaac
ctgctgctggccaggaaggacgccaccgaggccgagctgcgtgacgcgctggcgcgggcc
cggctgctggagtgggccgaccgcctgcccgacggtctggacacgctggtcggcgagcac
ggggcccggttgtccggtggtcagcgccagcggctcgccctggcccgggcgctgctcgcc
gacttccccgtcctcgtgctcgacgagccggccgagcacctcgacctgccgaccgccgac
gcgctcaccgccgacctgctggccgccaccgagggccgtacgagcctgctgatcacgcac
cggctggcggggctgcgggccgtggacgaggtgatcgtcctggaccggggccgggtcgtg
cagcgcggtacgtacgcggagctggcggccgtgccggggccgctgcgggagatggccggg
cgggaggcggcggcggaactgctggtgggagcggtgtga
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