Streptomyces coelicolor: SCO4035
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Entry
SCO4035 CDS
T00085
Symbol
sigF
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sco
Streptomyces coelicolor
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sco03021
]
SCO4035 (sigF)
Transcription machinery [BR:
sco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCO4035 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
MarR_2
NirdL-like_HTH
MarR
HTH_3
DUF134
DUF7343
HTH_5
HTH_37
Motif
Other DBs
NCBI-ProteinID:
CAC32306
Kitasato:
SCO4035
UniProt:
P37971
LinkDB
All DBs
Position
complement(4431932..4432795)
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AA seq
287 aa
AA seq
DB search
MPASTAPQAPPAPPAQAQAQAPAQAQEAPAPQRSRGADTRALTQVLFGELKGLAPGTPEH
DRVRAALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPERGVQFPTFAM
PTVVGEIKRYFRDNVRTVHVPRRLHELWVQVNSATEDLTTAFGRSPTTAEIAERLRITEE
EVLSCIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALDGVEHRDLVRHLLVQLPERE
QRILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFQRLRSANRIDA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgccggccagtactgcgcctcaagcaccgcccgcgccgcccgcccaggcccaggcccag
gcccccgcccaggcccaggaggctcccgcgccgcagcgcagccggggcgccgacacccgg
gccctgacccaggtgctcttcggcgagctgaagggcctcgccccgggcacgccggagcac
gaccgggtgcgcgcggccctcatcgaggccaacctcccgctggtgcgctacgccgccgcc
cgcttccgctcgcgcaacgagccgatggaggacgtcgtccaggtcggcaccatcgggctc
atcaacgccatcgaccgcttcgacccggagcggggcgtgcagttcccgacgttcgcgatg
cccacggtggtcggggagatcaagcggtacttccgcgacaacgtgcgcaccgtgcacgtg
ccgcgccggctgcacgagctgtgggtgcaggtcaacagcgccaccgaggacctgacgacc
gccttcgggcgctccccgaccaccgccgagatcgccgagcggttgcgcatcaccgaggag
gaggtgctgtcctgcatcgaggcggggcggtcgtaccacgccacctcgctggaggccgcg
caggagggcgacgggctgcccggactgctcgaccggctcggctacgaggacccggcgctg
gacggggtcgagcaccgggacctggtgcgccacctgctcgtccagctccccgagcgggag
cagcggatcctgctgctgcgctactacagcaacctcacgcagtctcagatcagcgccgaa
ctcggcgtctcccagatgcacgtctcgcggctactggcacgtagtttccagcggttgagg
tccgcgaaccggatcgacgcataa
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integrated database retrieval system
