Streptomyces coelicolor: SCO4296
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Entry
SCO4296 CDS
T00085
Symbol
SCD95A.29
Name
(GenBank) chaperonin 2
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sco
Streptomyces coelicolor
Pathway
sco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCO4296 (SCD95A.29)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sco03019
]
SCO4296 (SCD95A.29)
03110 Chaperones and folding catalysts [BR:
sco03110
]
SCO4296 (SCD95A.29)
03029 Mitochondrial biogenesis [BR:
sco03029
]
SCO4296 (SCD95A.29)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sco04147
]
SCO4296 (SCD95A.29)
Enzymes [BR:
sco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SCO4296 (SCD95A.29)
Messenger RNA biogenesis [BR:
sco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SCO4296 (SCD95A.29)
Chaperones and folding catalysts [BR:
sco03110
]
Heat shock proteins
HSP60 / Chaperonin
SCO4296 (SCD95A.29)
Mitochondrial biogenesis [BR:
sco03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SCO4296 (SCD95A.29)
Exosome [BR:
sco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCO4296 (SCD95A.29)
Exosomal proteins of other body fluids (saliva and urine)
SCO4296 (SCD95A.29)
Exosomal proteins of breast cancer cells
SCO4296 (SCD95A.29)
Exosomal proteins of colorectal cancer cells
SCO4296 (SCD95A.29)
Exosomal proteins of bladder cancer cells
SCO4296 (SCD95A.29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
DUF4844
CbiA
Motif
Other DBs
NCBI-ProteinID:
CAB93056
Kitasato:
SCO4296
UniProt:
Q9KXU5
LinkDB
All DBs
Position
4711115..4712740
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KAVEAVSAALLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISAYFATDMERMEASLDDPYILIANSKIGNVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGEVIS
EEVGLKLENATLDLLGSARKVVITKDETTIVDGAGSADQVQGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SQVFEKLELTGDEATGANAVKLALEAPLKQIAVNGGLEGGVVVEKVRNLTVGHGLNAATG
EYVDMIAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAPAGAPGGMPGGDMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggcctcgagcgcggcatgaac
cagctcgcggacgccgtcaaggtgacgctcggccccaagggccgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtctccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacg
gacgacgtcgccggtgacggtacgaccaccgcgaccgttctcgcccaggccctggtcaag
gaaggcctgcgcaacgtcgcggccggcgccaacccgatggccctgaagcgcggtatcgag
aaggccgtcgaggccgtctccgccgccctgctcgagcaggccaaggacgtcgagaccaag
gagcagatcgcctccacggcctcgatctccgccgccgacacccagatcggcgagctcatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcccagacc
ttcggtctggagctggagctcaccgagggtatgcgcttcgacaagggctacatctcggcg
tacttcgccaccgacatggagcgtatggaggcgtcgctcgacgacccgtacatcctgatc
gccaactccaagatcggcaacgtcaaggacctgctgccgctcctggagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtcgtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggctccgggcttcggc
gaccgccgcaaggccatgctcggcgacatcgccatcctcacgggcggcgaggtcatctcc
gaggaggtcggcctcaagctcgagaacgccacgctggacctgctgggcagcgcgcgcaag
gtcgtcatcaccaaggacgagaccacgatcgtggacggcgccggttcggccgaccaggtt
cagggccgcgtcaaccagatccgcgccgagatcgagaacagcgactcggactacgaccgc
gagaagctccaggagcgcctggcgaagctggccggcggcgtggccgtcatcaaggccggt
gccgccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgttcgcaat
gcgaaggcggccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctccaggcc
tcccaggtcttcgagaagctggagctgacgggtgacgaggcgaccggcgccaacgccgtg
aagctcgccctggaggccccgctgaagcagatcgccgtcaacggcggtctcgagggcggc
gtcgtcgtggagaaggtccgcaacctgaccgtcggccacggcctgaacgccgccaccggt
gagtacgtcgacatgatcgccgaaggcatcatcgacccggcgaaggtgacccgctctgcc
ctgcagaacgccgcctccatcgccgcgctgttcctcaccaccgaggccgtcatcgccgac
aagcccgagaaggccgctccggcgggcgccccgggcggcatgccgggtggtgacatggac
ttctga
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integrated database retrieval system