| Entry |
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| Symbol |
SCD82.27
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| Name |
(GenBank) DNA-directed RNA polymerase beta' chain (fragment)
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| KO |
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| Organism |
sco Streptomyces coelicolor
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:sco00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCO4655 (SCD82.27)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:sco03021]
SCO4655 (SCD82.27)
03400 DNA repair and recombination proteins [BR:sco03400]
SCO4655 (SCD82.27)
Enzymes [BR:sco01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SCO4655 (SCD82.27)
Transcription machinery [BR:sco03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCO4655 (SCD82.27)
DNA repair and recombination proteins [BR:sco03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCO4655 (SCD82.27)
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| SSDB |
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| Motif |
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| Other DBs |
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| Structure |
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| LinkDB |
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| Position |
5081644..5085543
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| AA seq |
1299 aa
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDEERRTRDLPSLEAHVSVERQQIEQRRDSDLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDSEGRSPKGE
GRAFGSSAEAIMAFDAGDLTLQAKIDIRFPVGTIPPRGFEPPAREEGEPEWQQGDTFTLK
TTLGRALFNELLPEDYPFVDYEVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFFWAT
RSGVTVAISDIVVPDAKKEIVKGYEGQDEKVQKQYERGLITKEERTQELIAIWTKATNEV
AEAMNDNFPKTNPVSMMVNSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLPIATRD
ADGTLRKAEDVETSVYARMLAEDVVIDGKVIAPANVDLGDVLIDALVAHGVEEVKTRSIL
TCESQVGTCAMCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEASGRVRIEETEKTKKIVVTPDDGSDETAFPISKRARL
LVGEGDHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERTKFETENRRVVQEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ |
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| NT seq |
3900 nt +upstreamnt +downstreamnt
gtgctcgacgtcaacttcttcgacgagctccggatcggtctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgccgtgagcggatgggccacatcgagctggccgctccc
gtcacccacatctggtacttcaagggcgtcccgtcgcgcctgggctacctgctcgacctg
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcaccttcgtggac
gaggagcgccgcacccgcgacctgccgtcgctggaggcccacgtctccgtcgagcgccag
cagatcgagcagcgccgcgactccgacctggaggcccgcgccaagaagctcgagaccgac
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggt
gccgagcgcgagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgcctcgac
gaggtgtggaaccggttcaagaacctcaaggtccaggacctggagggcgacgagctgctc
taccgcgagctgcgcgaccgcttcggcacctacttcgacggctcgatgggcgccgccgcg
ctccagaagcgcctggagtccttcgacctcgacgaggaggccgagcgcctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagaccagcaacagccccaagggcatggtgctggactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctgaagcggcttctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtggacgcg
ctcttcgacaacggccgccgcggccgcccggtcacgggccccggcaaccgtccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccgcttccgtcagaacctgctcggcaag
cgtgtggactactccgcgcgttccgtgatcgtcgtcggtccgcagctgaagctgcaccag
tgcggtctgccgaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgcggccgc
acggtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggttctgctgaaccgt
gcgccgacgctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagccggccgacggccgtccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccaccgactccgaggggcgcagccccaagggcgag
ggccgtgccttcggctcctccgccgaggcgatcatggccttcgacgccggagacctgacg
cttcaggcgaagatcgacatccgcttcccggtgggaaccatcccgccccgcggcttcgaa
cccccggcccgcgaggagggtgagccggagtggcagcagggtgacaccttcaccctgaag
accacgctgggccgtgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tacgaggtcggcaagaagcagctctccgagatcgtcaacgacctcgccgagcgctacccg
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttcttctgggccacc
cgttccggcgtcaccgtcgccatctccgacatcgtcgttcccgacgcgaagaaggagatc
gtcaagggctacgagggccaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggaagagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggcgatgaacgacaacttcccgaagaccaacccggtctccatgatggtgaactcg
ggtgctcgcggaaacatgatgcagatgcgtcagatcgcgggtatgcgcggtctggtgtcg
aacgcgaagaacgagacgatcccgcgtcccatcaaggcctccttccgtgagggcctgtcc
gtgctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgcgctg
cggaccgccgactcgggttacctcacgcgtcgtctggtcgacgtctcccaggacgtcatc
attcgcgaggaggactgcggcaccgagcgcggtctcaagctgccgatcgccacgcgcgac
gcggacggcacgctgcgcaaggccgaggacgtcgagaccagcgtgtacgcccgcatgctc
gccgaggacgtcgtcatcgacggcaaggtgatcgcgccggccaacgtcgacctgggtgac
gtcctgatcgacgccctggtcgcccacggcgtcgaggaggtcaagacccgctcgatcctg
acctgtgagtcccaggtcggcacgtgcgccatgtgctacggccgctcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggcacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacg
cagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccgaagggtgtcgccccg
atctccgaggcctccggccgcgtccggatcgaggagaccgagaagaccaagaagatcgtc
gtcacccccgacgacggcagcgacgagacggcgttcccgatctcgaagcgtgcccgtctg
ctggtgggcgagggcgaccacgtcgaggtgggccagaagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcgcatcctgggtcagcgtgccgtccaggtccacctggtcggcgag
gtccagaaggtctacaactcgcagggcgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgcgtgacgatcatcgagtccggcgacgccgagctgctgccc
ggcgagctggtcgagcggaccaagttcgagaccgagaaccgtcgtgtggtccaggagggc
ggtcacccggcctccggtcgtccgcagctgatgggtatcaccaaggcctcgctggcgacg
gaatcctggctgtcggccgcctccttccaggagacgacccgagtcctgacggacgcggcg
atcaacgccaagtccgacagcctcatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggtctgtcccgctaccgcaacatccgggtggagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
acgggctccggccaggccgttccgctggaggactacgactacggtccgtacaaccagtaa |
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