Streptomyces coelicolor: SCO4797
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Entry
SCO4797 CDS
T00085
Symbol
SCD63A.08
Name
(GenBank) putative ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sco
Streptomyces coelicolor
Pathway
sco03420
Nucleotide excision repair
sco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCO4797 (SCD63A.08)
03430 Mismatch repair
SCO4797 (SCD63A.08)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sco03400
]
SCO4797 (SCD63A.08)
Enzymes [BR:
sco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCO4797 (SCD63A.08)
DNA repair and recombination proteins [BR:
sco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCO4797 (SCD63A.08)
MMR (mismatch excision repair)
Other MMR factors
SCO4797 (SCD63A.08)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
CAB92660
Kitasato:
SCO4797
UniProt:
Q9KY67
LinkDB
All DBs
Position
5218624..5221119
Genome browser
AA seq
831 aa
AA seq
DB search
MSSLFDDSFLASLQTPRGHEEEPPPPPEDDHGPEPVPHDLFGGKFDAPPQRDTHYRDGAP
RPALDAAALLEGLNENQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLAERNVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAM
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGVPSEHPVDVPPEAEVPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQ
NYRSTQTILSAANAVIERNESRRPKNLWTNQGSGAQITGYVADTEHDEAQFVADEIDRLT
DAGEAKAGDVAVFYRTNAQSRVFEEVFIRTGLPYKVVGGVRFYERKEVRDVLAYLRVLAN
PEDSVPLRRILNVPKRGIGDRAEAMIDALSQREKISFPQALRRVDEAYGMAARSANAVKR
FNTLMEDLRTIVESGAGPATVLEAILERTGYLAELQASTDPQDETRIENLQELAAVALEF
EQERAEGEEAGTLADFLEKVALVADSDQIPDEEDGDGVVTLMTLHTAKGLEFPVVFLTGM
EDGVFPHMRALGQAKELEEERRLAYVGITRARERLYLTRSTLRSAWGQPSYNPPSRFLEE
IPAPHLEWKRTGANGPAPSAPVSGVAASLSSSRSRSRSSASGASGFATGRSAGAEQPTVS
LAVGDRVTHDQFGLGTVVGVKGSGSNAEATIDFGDTKPKRLLLRYAPVEKL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcgagcctccagaccccccggggtcacgag
gaggaacccccgccgccgcccgaggacgatcacggaccggagccggttccgcacgatctg
ttcggcgggaagttcgacgcgcccccgcagcgggacacccactaccgggacggcgccccg
cgccccgccctggacgccgccgcgctcctggaggggctgaacgagaaccagcgggccgcc
gtcgtccactccggctccccgctgctcatcgtggccggcgccggctccggcaagacccgc
gtcctcacccaccgcatcgcccacctgctggccgagcggaacgtccacccgggccagatc
ctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgccaacgcgatgtgggtgatgaccttccacagcgcgtgcgtgcgcatc
ctgcgccgcgagtcgaagaagctcggcttcacctcgtcgttctcgatctacgacgccgcc
gactccaagcggctcatggcgctggtctgccgcgacctggacctggaccccaagcgcttc
ccgcccaagtccttcagcgcgaagatcagcaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccgccgacggtttcgagaagaccctcgcccaggcctacgccatg
taccagtcgcggctgcgcgaggccaacgccctcgacttcgacgacctgatcatgacgacg
gtcaacctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccggcac
gtcctggtcgacgagtaccaggacaccaaccacgcccagtacgccctggtgcgcgagctg
gtcggcgtgccctcggagcaccccgtcgacgtgccgccggaggccgaggtgccgcccgcc
gagctgtgcgtggtgggcgacgccgaccagtcgatctacgccttccgcggcgccaccatc
cgcaacatcctccagttcgaggaggactacccggacgcgacgacgatcctgctggagcag
aactaccgctccacccagaccatcctcagcgccgccaacgcggtcatcgagcgcaacgag
tcccgccgccccaagaacctgtggaccaaccagggcagtggcgcgcagatcaccgggtac
gtcgccgacaccgagcacgacgaggcgcagttcgtcgccgacgagatagaccgcctcacc
gacgcgggcgaggccaaggccggcgacgtcgccgtcttctaccggaccaacgcccagtcc
cgtgtcttcgaagaggtcttcatccgcaccggcctgccctacaaggtcgtcggcggcgtc
cgcttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgggtgctggccaac
ccggaggactcggtgccgctgcgccgcatcctcaacgtccccaagcgcggcatcggcgac
cgcgcggaggcgatgatcgacgccctctcccagcgcgagaagatcagcttcccgcaggcg
ctcaggcgcgtcgacgaggcgtacggcatggccgcgcgctccgcgaacgccgtcaagcgg
ttcaacacgctcatggaggacctccgtacgatcgtcgagtccggcgccggaccggcgacc
gtcctggaggccatcctcgaacgcaccggctacctcgccgagttgcaggcctccaccgat
ccccaggacgagacccgcatcgagaacctccaggaactcgcggccgtcgccctggagttc
gagcaggagcgggccgagggcgaggaggccgggacgctggccgacttcctggagaaggtc
gcgctcgtcgccgactccgaccagatcccggacgaggaggacggcgacggcgtcgtcacc
ctgatgaccctgcacaccgccaagggcctggagttcccggtcgtcttcctcaccggcatg
gaggacggcgtcttcccgcacatgcgcgccctcggccaggccaaggagctggaggaggag
cggcggctcgcctacgtcggcatcacgcgcgcccgcgagcggctctacctgacccggtcg
acgctgcgcagcgcctggggccagccgtcgtacaacccgccctcgcggttcctggaggag
atcccggccccgcacctggaatggaagcggaccggggcgaacggtcccgcgccttccgct
ccggtctcgggcgtggccgcctcgctgtcgtcgtcccggtcgcggtcccggtcctcggcg
tcgggtgcgtccggcttcgccacgggcaggtcggccggcgccgagcagcccacggtctcg
ctggcggtcggcgaccgcgtcacgcacgaccagttcgggctcggcacggtggtcggcgtc
aagggctccggttcgaacgcggaggcgacgatcgacttcggggacaccaagccgaagcgg
ctgctgctgcggtacgcgccggtggagaagctctga
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