Streptomyces coelicolor: SCO5107
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Entry
SCO5107 CDS
T00085
Symbol
shdA2
Name
(GenBank) putative succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sco
Streptomyces coelicolor
Pathway
sco00020
Citrate cycle (TCA cycle)
sco00190
Oxidative phosphorylation
sco00650
Butanoate metabolism
sco00720
Other carbon fixation pathways
sco01100
Metabolic pathways
sco01110
Biosynthesis of secondary metabolites
sco01120
Microbial metabolism in diverse environments
sco01200
Carbon metabolism
Module
sco_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sco_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sco_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SCO5107 (shdA2)
00650 Butanoate metabolism
SCO5107 (shdA2)
09102 Energy metabolism
00190 Oxidative phosphorylation
SCO5107 (shdA2)
00720 Other carbon fixation pathways
SCO5107 (shdA2)
Enzymes [BR:
sco01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SCO5107 (shdA2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
DAO
GIDA
FAD_oxidored
Thi4
FAD_binding_3
Pyr_redox_3
NAD_binding_7
NAD_binding_8
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
CAC44314
Kitasato:
SCO5107
UniProt:
Q93IU8
LinkDB
All DBs
Position
complement(5548604..5550565)
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AA seq
653 aa
AA seq
DB search
MSVVDRQEWDVVVVGAGGAGLRAAVEARERGARTAVICKSLFGKAHTVMAEGGIAASMGN
VNSGDNWQVHFRDTMRGGKFLNQWRMAELHAQEAPQRVWELETWGALFDRTKDGRISQRN
FGGHEYPRLAHVGDRTGLELIRTLQQKIVSLQQEDFRETGDHESRLKVFQECTVTRLLQE
DRKVSGVFGYERESGRFFVLQAPSVVIATGGIGKSFKVTSNSWEYTGDGHALALLAGAPL
LNMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSEGRRFMFDYVPDVFKEKYAESE
AEGDRWYDDPDHNRRPPELLPRDEVARAINAEVKEGRGSPHGGVFLDVSTRMPAEVIRRR
LPSMYHQFKELADVDITAEAMEVGPTCHYVMGGIAVDSDTAAARGVPGLFAAGEVAGGMH
GSNRLGGNSLSDLLVFGRRAGRYAAEYAAGRTEEGTRARVDDAQVDAAAAEALRPFSAEA
QEPGAGPPENPYTLHQELQQTMNDLVGIIRREAEMKQALEKLAELRVRARRAGVEGHRQF
NPGWHLALDLRNMLLVSECVARAALERTESRGGHTREDHPSMDRRWRPANLLCSLADPAG
EAAGEAAATDPERGRIALERQTTEPIRPDLLALFDKEELVKYLADEELEGRSE
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggtcgaccggcaggaatgggacgtcgtcgtggtgggcgcgggcggtgccggg
ctgcgcgccgccgtcgaggcccgcgagcggggcgcccgtacggccgtgatctgcaagtcg
ctgttcggcaaggcgcacacggtgatggccgagggcggcatcgccgcctccatgggcaac
gtcaactccggggacaactggcaggtccacttccgcgacaccatgcgcggcggcaagttc
ctcaaccagtggcggatggccgagctgcacgcccaggaggccccgcagcgggtgtgggag
ctggagacctggggcgcgctgttcgaccggacgaaggacggccggatctcgcagcgcaac
ttcggcggccacgagtacccgcgcctcgcccacgtcggcgaccgcacgggcctggagctg
atccgcaccctccagcagaagatcgtctcgctccagcaggaggacttccgcgagaccggg
gaccacgagtcccggctgaaggtcttccaggagtgcacggtcacccgcctgctccaggag
gaccggaaggtctcgggggtcttcggctacgagcgcgagagcggccgcttcttcgtcctc
caggcgccctcggtggtgatcgcgacgggcggcatcggcaagtcgttcaaggtgacgtcg
aactcgtgggagtacaccggcgacggccacgccctggcgctgctggccggggcgccgctg
ctcaacatggagttcgtgcagttccacccgacgggcatggtctggccgccctcggtgaag
ggcatcctcgtcaccgagtcggtgcgcggcgacggcggggtgctgaggaactccgagggc
aggcggttcatgttcgactacgtcccggacgtcttcaaggagaagtacgccgagtcggag
gccgagggcgaccgctggtacgacgacccggaccacaaccggcgcccgcccgaactcctc
ccccgcgacgaggtcgcccgcgcgatcaacgccgaggtgaaggagggccggggctcaccg
cacggcggcgtcttcctcgacgtgtcgacccggatgcccgccgaagtgatcaggcgccgg
ctgccctcgatgtaccaccagttcaaggagctggcggacgtggacatcacggcggaggcg
atggaggtcgggccgacctgccactacgtgatgggcggcatcgccgtcgactccgacacc
gccgccgcccgcggggtgccgggactgttcgcggccggtgaggtggccggcggcatgcac
ggctccaaccggctgggcggcaactcgctgtccgacctgctggtgttcgggcggcgggcg
ggccggtacgcggccgagtacgcggcggggcggacggaggagggcacccgcgcccgggtc
gacgacgcccaggtcgacgcggccgccgcggaggccctgcggccgttctccgccgaggcg
caggagcccggcgcgggcccgccggagaacccgtacaccctccaccaggaactccagcag
accatgaacgacctggtggggatcatccgccgcgaggcggagatgaagcaggccctggag
aagctggcggagctgcgggtgcgcgcccgccgggccggggtcgaggggcaccggcagttc
aacccgggctggcacctcgccctggacctgcgcaacatgctgctggtcagcgaatgcgtg
gcgcgggccgcgctggagcgcaccgagtcgcgcggcgggcacacccgtgaggaccatccg
tcgatggaccggcgctggcgcccggccaacctgctctgctcgctggccgacccggcgggc
gaggcagcgggcgaggcggcggcgacggacccggagcgcggccggatcgccctggagcgg
cagaccaccgagcccatccggcccgacctgctcgccctcttcgacaaggaggagctggtg
aagtacctcgccgacgaggaactggagggccggtccgaatga
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