Streptomyces coelicolor: SCO5737
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Entry
SCO5737 CDS
T00085
Symbol
gpsI
Name
(GenBank) guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sco
Streptomyces coelicolor
Pathway
sco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCO5737 (gpsI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sco03019
]
SCO5737 (gpsI)
03016 Transfer RNA biogenesis [BR:
sco03016
]
SCO5737 (gpsI)
Enzymes [BR:
sco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SCO5737 (gpsI)
Messenger RNA biogenesis [BR:
sco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SCO5737 (gpsI)
Transfer RNA biogenesis [BR:
sco03016
]
Prokaryotic type
tRNA degradation factors
SCO5737 (gpsI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
CAD55364
Kitasato:
SCO5737
UniProt:
Q8CJQ6
LinkDB
All DBs
Position
6259773..6261992
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AA seq
739 aa
AA seq
DB search
MENETHYAEAVIDNGAFGTRTIRFETGRLARQAAGSAVAYLDDDTMVLSATSASKNPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQV
VATIMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALIRGQWVAFPTHTELEDA
VFDMVVAGRVLEDGDVAIMMVEAEATDKTIKLVEGGAEAPTEEVVAAGLDAAKPFIKVLC
RAQADLAAKAAKPTGEFPIFLDFQDDVLEALTGAVKPELTQALTIAGKQEREAELDRVKG
LAAEKLLPEFEGREKEISAAYRALTKSLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEINGETHYVALTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAAQGSQAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGAKVQVEIAEIDSRGKLSL
IPVIEGEAGDDDKKDDADK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaagccgtgatcgacaacggcgcgttcggcacccgc
accatccgcttcgagacgggccgcctggcccgtcaggccgccggttccgccgtggcgtac
ctggacgacgacaccatggtgctgtcggccaccagcgcctccaagaacccgaaggaccag
ctcgacttcttccccctgacggtggacgtcgaggagcggatgtacgccgccggcaagatc
cccggcagcttcttccgccgtgagggccggccctccgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccaggtc
gtcgcgacgatcatggcgctcaaccccgaccacctgtacgacgtcgtggcgatcaacgcc
gcctccgcgtccacgcagctggccggtctgcccttctccggcccgatcggcggcgtccgc
gtcgcgctgatccgcggccagtgggtggccttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgcgggccgcgtcctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgacaagaccatcaagctggtcgagggcggcgccgaggcgccc
accgaggaggtcgtcgccgccggtctggacgccgcgaagcccttcatcaaggtgctgtgc
cgcgcccaggccgacctcgccgccaaggccgccaagccgaccggcgagttcccgatcttc
ctggacttccaggacgacgtcctcgaggcgctgaccggcgccgtcaagcccgagctgacg
caggcgctcaccatcgccggcaagcaggagcgcgaggccgagttggaccgcgtcaagggg
ctcgccgccgagaagctcctcccggagttcgagggccgcgagaaggagatctccgccgcg
taccgcgcgctgaccaagtccctggtccgcgagcgcgtcatcaaggagaagaagcgcatc
gacggccgcggtgtcaccgacatccgcaccctggccgccgaggtcgaggccatcccgcgc
gtgcacggctccgccctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctg
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggcgagaccggccgcgtgggctccccg
aagcgccgcgagatcggccacggcgctctcgccgagcgcgccatcgtgccggtgctgccg
acgcgcgaggagttcccctacgcgatccgccaggtgtccgaggccctcggctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccg
ctgaaggcccccgtcgccggtatcgccatgggcctgatctcccaggagatcaacggcgag
acgcactacgtcgccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaaggagttcgtgaccgccctccagctcgacaccaagctggac
ggcatccccgcctccgtcctggccgccgccctcaagcaggcccgtgacgcccgcctccac
atcctcgacgtgatgatggaagcgatcgacacgccggacgagatgtccccgaacgcgccg
cggatcatcaccgtgaagatccccgtcgacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacacgggcgccgacatcacgatcgaggacgacggc
acgatctacatcggtgccgcccagggctcgcaggccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgcccgaggtcggcgagcgctacctgggtacggtcgtcaag
acgaccaccttcggcgcgttcgtctccctgctgcccggcaaggacggtctgctgcacatc
tcgcagatccgcaagctcgccggcggcaagcgcgtggagaacgtcgaggacgtcctcggc
gtgggcgcgaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctctccctg
atccccgtgatcgagggcgaagcgggcgacgacgacaagaaggacgacgccgacaagtga
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