KEGG   Streptomyces coelicolor: SCO6520
Entry
SCO6520           CDS       T00085                                 
Symbol
SC5C7.05
Name
(GenBank) putative RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
sco  Streptomyces coelicolor
Brite
KEGG Orthology (KO) [BR:sco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sco03021]
    SCO6520 (SC5C7.05)
Transcription machinery [BR:sco03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SCO6520 (SC5C7.05)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_24 MarR_2 HTH_23 GerE HTH_Crp_2 MarR DUF7343 Sigma70_ECF HTH_3 DUF7342 DUF134 HTH_31 YdaS_toxin
Other DBs
NCBI-ProteinID: CAA20617
Kitasato: SCO6520
UniProt: O86702
LinkDB
Position
7210082..7210882
AA seq 266 aa
MPIHASVKHPHDDAPDTADAFRRLATLPDGPEHDELRDRIVEAWLPMAERLAGRFRSRGE
SFEDLRQVAALGLVKAVDRYDPERGNAFESYAVPTITGEIKRHFRDHMWTLHVPRRVQEL
RNRVRFAGQDLSQTIPGRRPTVAEIAERAELSEEDVRVGLEALESFTALSLDAELPGSED
GYSLGDALGAPDPALDTVVDREAVKDRLAALPPRERAILYMRFFNDMTQSRIAEQLGISQ
MHVSRLITRCCDRVREQVLRDPGPQA
NT seq 801 nt   +upstreamnt  +downstreamnt
atgccgatccacgccagcgtgaagcacccgcacgacgacgcccccgacaccgccgacgcc
ttccgtcggctcgccacccttcccgacggtcccgagcacgacgagctgcgcgaccggatc
gtcgaggcctggctgcccatggccgaacggctggcgggacgattccgcagccgcggcgag
agcttcgaggacctgcgccaggtcgcggccctcggcctggtcaaggccgtcgaccggtac
gaccccgagcgcggcaacgccttcgagagctacgccgtaccgaccatcaccggggagatc
aagcgccacttccgcgaccacatgtggaccctgcacgtgccgcgccgggtccaggaactg
cgcaaccgcgtgcgcttcgccggccaggacctgtcccagaccattccgggccgcaggccc
accgtcgccgagatcgccgagcgcgccgaactgagcgaggaggacgtccgggtcgggctc
gaggcgctggagagcttcaccgccctgtccctggacgccgaactccccggcagcgaggac
ggctactcgctgggcgacgcgctcggcgcccccgacccggccctcgacacggtcgtcgac
cgcgaggcggtcaaggaccggctggccgccctgcctccgcgcgagcgcgccatcctgtac
atgcgcttcttcaacgacatgacccagagccgtatcgcggagcagctcggcatctcccag
atgcacgtctcccgcctgatcacccgctgctgcgaccgggtgcgggaacaggtcctgcgg
gatccgggtccgcaggcgtga

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