Streptomyces coelicolor: SCO7051
Help
Entry
SCO7051 CDS
T00085
Symbol
rho
Name
(RefSeq) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sco
Streptomyces coelicolor
Pathway
sco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCO7051 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sco03021
]
SCO7051 (rho)
03019 Messenger RNA biogenesis [BR:
sco03019
]
SCO7051 (rho)
Transcription machinery [BR:
sco03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SCO7051 (rho)
Messenger RNA biogenesis [BR:
sco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SCO7051 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
Spore_III_AA
AAA_22
DUF3086
ATPase_2
ATPase
Motif
Other DBs
NCBI-GeneID:
1102489
Kitasato:
SCO7051
LinkDB
All DBs
Position
complement(7841463..7842710)
Genome browser
AA seq
415 aa
AA seq
DB search
MSEVLFPAVRRRVVRPLARLFPSLRMSHARVLERTDHMTTTLEHPPVQHAQADIASGVLD
IETGGKGRLRGRNLQPEPADPALSPALIRRHGLRRGDLVEGVCGDRRTLTDVVRVNGRTP
DRRSRPHFADLTPLHPHERLRLEHPAAGLAGRVVDLLAPVGKGQRGLIVAPPKTGKTVLL
QQFAAAVAGNHPEARLMVVLLDERPEEVTDMRRSVRGEVYSSTFDRSARQHIALAELVIE
RAKRLVEAGEDVVILLDSLTRLCRAHNNAASSGGRTLSGGVDAGALLGPKRFFGAARKAE
EGGSLTILATALVETGSRADDFYFEELKSTGNMELRLSREPASRRVFPAVEPVGSGTRRE
ELLLSGAETTALRGLRRALVARDGQSGLETLLERLRRTPDNATFLRQVQPTLPAG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaggtgctgttccccgccgtccggaggcgtgtcgtccgacccctcgcgcggctc
ttcccttccttgcgcatgtcccatgcccgtgtcctcgaaaggaccgaccacatgaccacc
acactcgaacacccccctgtacagcacgcccaggccgacatcgcgagcggtgtcctagac
atcgaaacgggcggcaaggggcgcctgcgcggcaggaacctccagcccgagccggccgac
ccggccctctcccccgcgctgatccgccggcacgggctgcgcaggggcgacctcgtcgaa
ggggtgtgcggcgaccggcgcaccctgaccgacgtcgtccgcgtcaacgggcgtacgccc
gaccggcggagccggccgcacttcgccgacctgaccccgctgcacccgcacgagcggctg
cggctcgaacacccggcggccggtctcgccggacgcgtcgtcgatctgctcgccccggtc
ggcaagggccagcgcggactgatcgtcgccccgccgaagaccggcaagaccgtcctcctc
cagcagttcgccgccgcggtggccggcaaccaccccgaggcccgcctgatggtggtgctg
ctcgacgaacgccccgaggaggtcaccgacatgcggcgctcggtacgcggcgaggtctac
tcctcgaccttcgaccggagcgccaggcagcacatcgcgctcgccgagctggtgatcgag
cgggccaagcggctcgtcgaggccggcgaggacgtcgtcatcctcctcgactccctcacc
cggctgtgcagggcgcacaacaacgccgcctcctccggcggccgcacgctcagcggcggc
gtcgacgccggggcgctgctgggtcccaagcggttcttcggcgcggcccgcaaggcggag
gagggcggttccctcaccatcctcgccaccgccctggtcgagaccggctcgcgtgccgac
gacttctacttcgaggagctgaagagcaccggcaacatggaactgcggctgagccgggag
ccggcctcccgccgggtcttcccggccgtcgaaccggtcggctcgggcacccggcgcgag
gagctgctgctgtccggtgccgagacgaccgccctgcgcgggctgcggcgggccctggtg
gcccgggacgggcagtccggcctggagaccctgctggagcggctgcgccggacgccggac
aacgccacgttcctgcgacaggtccagccgacgctgcccgcgggctga
DBGET
integrated database retrieval system
