Streptomyces coralus: QU709_03525
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Entry
QU709_03525 CDS
T09650
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scoa
Streptomyces coralus
Pathway
scoa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QU709_03525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scoa03400
]
QU709_03525
Enzymes [BR:
scoa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QU709_03525
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QU709_03525
DNA repair and recombination proteins [BR:
scoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QU709_03525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
WLW50481
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All DBs
Position
complement(745957..746820)
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AA seq
287 aa
AA seq
DB search
MPELPEVEALRDFLTEHLVGHEIVRVLPVAISVLKTYDPPPTALEGHEVTAVHRHGKFLD
VETAGGPRLVTHLARAGWLHWKDRLPSGMPRPGKGPLALRVALETGEGFDLTEAGTQKRL
AVYVVQDPQQVPGIARLGPDPLADDFDEARLAALLKGERRRLKGALRDQSLIAGVGNAYS
DEILHAAKMSPFKPTSSLTPEDITILFRALRATLTDALSRNSGLAAARLKSEKKSGLRVH
GRTGAPCPVCGDTIRDVSFADSSLQYCPTCQTGGKPLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcccgaggtcgaggcgctcagggactttctcaccgagcacctcgtcggc
cacgagatcgtacgggtgctgcccgtcgcgatcagtgtcctgaagacgtacgaccctccg
ccgacggccctggagggccacgaggtcacggccgtgcaccggcacggcaagttcctcgat
gtggagacggcgggcggcccccgcctggtgacccacctggcccgcgcgggctggctgcac
tggaaggaccggctcccgagcggcatgccccgccccggcaaggggcccctcgccctccgc
gtcgcgctggagaccggcgagggcttcgacctcacggaggcgggcacccagaaacggctc
gcggtgtacgtcgtccaggatccccagcaggtcccgggcatcgcccgtctcggccccgac
cccctcgccgacgacttcgacgaggcccgccttgccgccctgctgaagggtgagcgccgc
cggctgaagggcgccctgcgcgaccagtccctgatcgcgggcgtcggcaacgcctacagc
gacgagatcctgcacgccgcgaagatgtcccccttcaaaccgacgtcctccctcaccccc
gaggacatcaccatcctcttccgggccctgcgcgccaccctcaccgacgcgctctcccgc
aacagtggcctggccgccgcccgcctcaagtccgaaaagaagtccggcctccgcgtccac
ggccgcaccggcgccccctgccccgtctgcggcgacaccatccgcgacgtctccttcgcc
gactcctccctccagtactgccccacctgccaaacgggaggcaagcccctggcggaccgc
aggatgtcacggttgctcaagtga
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