Streptomyces coralus: QU709_06445
Help
Entry
QU709_06445 CDS
T09650
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
scoa
Streptomyces coralus
Brite
KEGG Orthology (KO) [BR:
scoa00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
QU709_06445
Enzymes [BR:
scoa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
QU709_06445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
YbgS
EF-hand_5
Motif
Other DBs
NCBI-ProteinID:
WLW51021
LinkDB
All DBs
Position
complement(1442677..1444587)
Genome browser
AA seq
636 aa
AA seq
DB search
MQHPHPHPHPDPRPRPRGHRRRRVLLSALTVTTALVGAGLTTLATGDTAEAATARQVEKL
DRGVVSVHTDAGNLVSWRWLGTDPGDVSFNVYRAGTKVNSTPVTGSTNYFHSGAPAQADY
TVRAIVGGVEQADSVHAVQLRTGYKDVPISPPAGGTTPDGVAYTYEANDASVADLDGDGA
LDFVLKWQPTNAKDNSQSGYTGNTFVDGVKLDGTRLWRIDLGRNIRSGAHYTQFQAYDYD
GDGKAEVAMKTADGTRDGTGAVIGSSSADHRNSSGYILSGPEFLTMFNGQTGKAMQSVDY
VPARGTVSSWGDSYGNRVDRFLAGTAYLDGARPSVIMARGYYTRTVIAAWDWRNGTFTRR
WTFDTTSSTNTGKGYDGQGNHSLSIADVDADGKDEIVYGAMTVDDNGNGLWTTRLGHGDA
GHVGDLNPSRAGLEYFKVSESTSQPGSWMADARTGQILWQTASGADNGRGVAADIYAGSA
GAEAWSASDTTLRSATGASLGREPSSINFLSWWDGDPVRELLDGTRVDKYGTSGDTRLLT
ASGVHSNNGTKATPALSGDILGDWREEVVWPTSNNTALRVYSTPVETTTKITTLLHDTMY
RTALAWQNTAYNQPPHPSFFIGNGMPTAPRPTVYTP
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcacccgcacccgcacccccacccggacccgcggccccgcccgcgcggacaccgc
agacgccgcgtgctcctctccgccctgaccgtcaccacggccctggtcggcgcgggcctc
accaccctcgccaccggcgacaccgccgaggcggccaccgcccgccaggtcgagaagctc
gaccgcggtgtcgtcagcgtgcacaccgacgccggcaacctggtcagctggcgctggctc
ggcaccgacccgggcgacgtctccttcaatgtctaccgggccggcaccaaggtcaactcc
acgcccgtcaccggctccaccaactacttccactccggcgcccccgcccaggccgactac
acggtccgcgcgatcgtcggcggcgtcgagcaggccgactccgtccacgccgtccaactc
cgcaccggctacaaggacgtcccgatctccccgcccgccggcggcaccacccccgacggc
gtcgcctacacctacgaggccaacgacgcctcggtggccgacctcgacggcgacggcgcc
ctcgacttcgtcctgaagtggcagcccaccaacgccaaggacaactcccagtccggttac
accggcaacaccttcgtcgacggcgtcaagctcgacggcacccgcctgtggcgcatcgac
ctgggccgcaacatccgctccggcgcccactacacgcagttccaggcgtacgactacgac
ggcgacggcaaggccgaggtcgccatgaagaccgccgacggcacccgggacggcaccggc
gcggtcatcggcagctcctccgccgaccaccgcaactcctccggctacatcctgtccggc
cccgagttcctcaccatgttcaacggccagaccggcaaggccatgcagagcgtcgactac
gtcccggcccgcggcacggtctcctcctggggcgactcctacggcaaccgcgtcgaccgc
ttcctggccggcaccgcctacctggacggcgcccgcccctcggtgatcatggcccgcggc
tactacacccgcacggtgatcgccgcctgggactggcggaacggcaccttcacccgccgc
tggaccttcgacaccacctcctccaccaacaccggcaagggctacgacggccagggcaac
cacagcctgtccatcgcggacgtcgacgccgacggcaaggacgagatcgtctacggcgcc
atgaccgtggacgacaacggcaacgggctgtggacgacgaggctcggtcacggcgacgcg
ggccatgtcggcgacctcaacccctcccgggcgggcctggagtacttcaaggtctccgag
agcacgagtcagcccggctcctggatggcggacgcgcgcaccggccagatcctctggcag
accgcctccggcgccgacaacggccgcggagtcgccgccgacatctacgccggcagcgcg
ggcgccgaggcctggtccgcctccgacaccaccctgcgctcggcgaccggcgcctccctc
ggccgggagccctccagcatcaacttcctgtcctggtgggacggtgaccccgtccgcgaa
cttctcgacggcacccgcgtcgacaagtacggcacctccggcgacacccgcctgctgacc
gcctccggcgtccactccaacaacggcaccaaggccaccccggccctgtccggcgacatc
ctcggcgactggcgcgaggaggtcgtctggccgacgtcgaacaacacggccctgcgggtg
tactcgacgccggtcgagaccaccacgaagatcacgaccctgctgcacgacaccatgtac
cgcacggctctggcctggcagaacaccgcctacaaccagccgccgcacccgagcttcttc
atcggcaacggcatgccgacggcaccgcggccgacggtctacacgccgtag
DBGET
integrated database retrieval system
