Streptomyces coralus: QU709_08125
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Entry
QU709_08125 CDS
T09650
Name
(GenBank) rhamnogalacturonan lyase B N-terminal domain-containing protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
scoa
Streptomyces coralus
Brite
KEGG Orthology (KO) [BR:
scoa00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
QU709_08125
Enzymes [BR:
scoa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
QU709_08125
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
PEGA
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
WLW51322
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Position
1815125..1816804
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AA seq
559 aa
AA seq
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MSGSASNRPVRRRTFVLGTAAAAGSAALAGPLAQTASAAAFGYTDDGTNYVVDTGASLVF
KVNKSNGDLTSLVYKGTEYQGYGGMNSHVESGLGASTVSIRQSGTTILISVTHGTLRHYY
AARSGENNIYLWTNRADTSVASSRYIVRVKKGLFLNDEPDSYTFTNSTIEASDVFAKSDG
QTRSKHYSKLRVMDYTHIGWSANGVGLWIVRSNHEKAAGGPFYRSLLRHQSADGGGLYEI
LHYAQNQTENERFGLQGPYVIAFTDGGAPSSSLFPGTLTTSWADSLGIAGYVGAGGRGRV
AGVGITGRNTAHPYTVGLANSAAQYWGSARSSDGYFSIAGVLPGTYTLTVYKSELAVYTT
SVTVTAGGTTTLNSIAIPSTNDPSNAGAIWRINDWTGTPAGFKNADLMTYAHPSDVRAAA
WTGNVVIGSGSETSAFPCYLWKDVNSGLLVYFKLTAAQAAAAHTLRIGVTTAYANGRPQV
TVNSWASPIPSPPTQPSTRSLTNGSYRGNNHTFTYNVPASAWLTDTGQYNVLKIDVVSGS
GAAGYLSAGTSIDAIDLLA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatccgcctcgaacagaccggtccgtcgccgcaccttcgtcctcggcacggcg
gccgccgcaggctcggccgccctcgccgggccgctcgcacagaccgcctccgccgcggcc
ttcggctacaccgacgacggcacgaactacgtcgtcgacaccggcgccagcctggtgttc
aaggtcaacaagtccaacggcgacctgacctcgctggtctacaagggcaccgagtaccag
ggctacggcggcatgaactcgcacgtcgagtccggcctcggcgcctccaccgtgagcatc
cggcagtccggtacgaccatcctgatctcggtcacgcacggcacgctcaggcactactac
gcggcccgcagcggcgagaacaacatctacctgtggaccaaccgggccgacacctccgtc
gcgtcgagccggtacatcgtgcgcgtgaagaagggcctgttcctcaacgacgagcccgac
tcctacacgttcacgaactccaccatcgaggcctcggacgtgttcgcgaagtccgacggc
cagacccgctccaagcactactccaagctgcgggtgatggactacacccacatcggctgg
agcgcgaacggcgtcggcctgtggatcgtccgctccaaccacgagaaggccgcgggcggc
cccttctaccgctcgctgctgcgccaccagagcgccgacggcggcggtctgtacgagatc
ctgcactacgcccagaaccagaccgagaacgagcgcttcggcctccagggcccgtacgtc
atcgccttcacggacggcggcgccccctcctcgtcgctgttcccgggcacattgaccacc
tcctgggcggactcgctcggcatcgccggttacgtcggcgcgggcggccggggccgggtc
gcgggcgtcggcatcaccggccgcaacaccgcccacccctacaccgtcggcctcgccaac
tcggccgcccagtactggggttcggcccgctcctcggacggctacttctccatcgccggc
gtcctgccggggacgtacacgctgaccgtctacaagagcgaactcgccgtgtacaccacc
tccgtgacggtcaccgccggtggcacgacgaccctgaactcgatcgcgatcccgtccacg
aacgacccgtccaacgcgggcgcgatctggcggatcaacgactggacgggcaccccggcc
ggcttcaagaacgccgacctgatgacgtacgcccacccgtcggacgtgcgggccgccgcc
tggaccggcaacgtggtgatcggcagcggcagcgagacctcggccttcccctgctacctg
tggaaggacgtcaacagcggtctgctcgtgtacttcaagctgaccgccgcccaggccgcc
gccgcgcacaccctgcgcatcggcgtgacgacggcctacgccaacggccgcccgcaggtc
accgtcaactcctgggcctcgccgatcccctccccgcccacccagccgagcacccggtcc
ctgaccaacgggtcctaccggggcaacaaccacacgttcacctacaacgtcccggccagt
gcctggctcacggacaccggtcagtacaacgtgctgaagatcgacgtggtgagcggttcg
ggggccgccggctacctcagcgcgggcacgtcgatcgacgcgatcgacctgctcgcctga
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