Streptomyces coralus: QU709_11225
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Entry
QU709_11225 CDS
T09650
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
scoa
Streptomyces coralus
Pathway
scoa02020
Two-component system
scoa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QU709_11225 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QU709_11225 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scoa03021
]
QU709_11225 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
scoa02035
]
QU709_11225 (whiG)
Transcription machinery [BR:
scoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QU709_11225 (whiG)
Bacterial motility proteins [BR:
scoa02035
]
Flagellar system
Flagellar assembly proteins
Stator
QU709_11225 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
UPF0122
HTH_23
HTH_31
Motif
Other DBs
NCBI-ProteinID:
WLW51911
LinkDB
All DBs
Position
complement(2571194..2572036)
Genome browser
AA seq
280 aa
AA seq
DB search
MPQHTSGSDRAAIPPAAREGGSVRPPAPSTLDELWRSYKSTGDERLREQLILHYSPLVKY
VAGRVSVGLPPNVEQADFVSSGVFGLIDAIEKFDIDREIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARNVERAYATLEAKLRRTPSEGEVAAEMGIAVDDLHAVFSQLSLANVVAL
EELLHVGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRFLARAINTLPEREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLASFGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtccgaccgggcggcgatccccccagccgcccgcgagggt
ggcagcgtgcggccgcccgctccctcgacgctcgacgagctgtggcggtcgtacaagtcg
acgggggacgagcggctgcgcgagcagctgatcctgcactactcaccgctggtgaagtac
gtggcgggacgggtcagcgtcgggctgccgcccaatgtggaacaggccgacttcgtctcg
tcgggggtgttcgggctgatcgacgcgatcgagaagttcgacatcgaccgggagatcaag
ttcgagacctacgcgatcacccggatccgcggcgccatgatcgacgagctgcgggcgctg
gactggatcccgcggtcggtgcggcagaaggcgcgcaacgtcgagcgggcgtacgcgacg
ctggaggcgaagctcaggcggacgccgagcgagggcgaggtggcggccgagatggggatc
gcggtggacgacctccatgccgtcttcagccagttgtcgctggccaacgtggtggccctg
gaggagctgctgcacgtcggcggtgagggcggcgaccggctgagcctcatggacacgctg
gaggacaccgccgccgacaacccagtcgaggtggccgaggaccgggagctccggcggttc
ctggcacgggcgatcaacacgctgcccgagcgggagaagaccgtcgtgacgctgtactac
tacgagggactcacccttgccgagatcggcaacgtgctcggtgtcaccgagagccgggtc
agtcagatccacaccaagtccgtgctccagctgcgcgcgaaactggcgagcttcggtcgg
tga
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integrated database retrieval system
