Streptomyces coralus: QU709_21700
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Entry
QU709_21700 CDS
T09650
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scoa
Streptomyces coralus
Brite
KEGG Orthology (KO) [BR:
scoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scoa03021
]
QU709_21700
Transcription machinery [BR:
scoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QU709_21700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_3
Sigma70_ECF
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
WLW53817
LinkDB
All DBs
Position
complement(4910494..4911375)
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AA seq
293 aa
AA seq
DB search
MSADQGSSKVLTLTKSEAAPALDDVTAVEPATAPALPTSGAIDTRTLSRSLFLRLAALDE
NSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEF
PTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELSQKLDRSPTVAELAAVL
GVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDTALEGVEYRESLKPLL
AKLPPRERQIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLISD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagatcagggcagctcgaaggtgctcacgctcacgaagagcgaggctgcgccc
gcgctcgacgacgttacggccgttgagcccgctacggccccggctctcccgacctcggga
gccatcgacacccgcaccctgtcccgctccctgttcctgcggctcgccgcactcgacgag
aacagccccgagcgtgcctacgtccgggacaccctcatcgagctcaatctcccgctcgtc
cgctacgcggcggcccgcttccgctcacggaacgagccgatggaggacatcgtccaggtc
ggcaccatcggcctgatcaaggcgatcgaccgcttcgactgcgaacggggcgtggagttc
ccgacgttcgcgatgccgacggtggtcggcgagatcaagcggttcttccgcgacacctcg
tggtcggtgcgcgtcccgcgccgcctgcaggaactgcggctggcgctcaccaaggccagc
gacgagctctcccagaagctcgaccgctcccccacggtggccgaactcgccgcggtgctg
ggcgtgtccgaggaggacgtcgtcgacggcctcgcggtcggcaacgcctacaccgcctcc
tcgctggactccccggccccggaggacgacggcggcgagggctccctcgcggaccgcctc
ggctacgaggacaccgcgctggagggcgtggagtaccgggagtcgctgaaaccgctgctg
gccaagctgccaccccgtgagcggcagatcatcatgctgcgcttcttcgccaacatgacc
cagtcgcagatcggcgaggaggtcggcatctcccagatgcacgtctcccggctactcacc
cgcacgctggcccagctgcgggaaggcctcatctccgactga
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