Streptomyces coralus: QU709_23595
Help
Entry
QU709_23595 CDS
T09650
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
scoa
Streptomyces coralus
Brite
KEGG Orthology (KO) [BR:
scoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scoa03016
]
QU709_23595 (thpR)
Enzymes [BR:
scoa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
QU709_23595 (thpR)
Transfer RNA biogenesis [BR:
scoa03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
QU709_23595 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
aGPT-Pplase3
Motif
Other DBs
NCBI-ProteinID:
WLW54153
LinkDB
All DBs
Position
5291013..5291585
Genome browser
AA seq
190 aa
AA seq
DB search
MRLFAAVLPPEDVTAELVSAVAELKRLPGADGLRWTGVPGWHYTLAFYGEVDDDVVPELS
ERLARAARRTDPFALAVRGGGQFGHGRALWAGAAGDLAALRLLAERAEAAARKAGVETGE
HRRYRAHLTVARSRTDVDVREFVEALSGFAGRTWAVEELALVRSNLPKSGVPGEQPRYEV
VGRWGLGAAG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgccgccgtgctgccaccggaggacgtcaccgccgaactcgtctcggcc
gtggccgagttgaagaggcttcccggagcggacgggctgcgctggaccggggttcccggg
tggcactacacgctcgccttctacggcgaggtcgacgacgacgtcgtacccgagctgtcg
gaacggctcgcgcgggccgcccggcgtaccgatcccttcgcgctggcggtgcgtgggggc
gggcagttcgggcacgggcgggcgctgtgggccggggctgcgggggacctggccgcgttg
cggttgctggcggagcgggcggaggcggcggcgcggaaggcgggggtggagacgggggag
catcggcggtaccgcgcgcatctgacggtggcgcggagccggacggatgtggatgtgcgg
gagttcgtggaggccctgtcggggttcgccggccgtacctgggccgtggaggagctggcc
ctcgtgcggagcaacctgccgaagtcgggggtgccgggggagcagccgcgctatgaggtg
gtcggtcgttgggggcttggagcggccggttag
DBGET
integrated database retrieval system
