Streptomyces coralus: QU709_27475
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Entry
QU709_27475 CDS
T09650
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
scoa
Streptomyces coralus
Pathway
scoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QU709_27475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scoa03400
]
QU709_27475
Enzymes [BR:
scoa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QU709_27475
DNA repair and recombination proteins [BR:
scoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QU709_27475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
NAT10_TcmA_helicase
PIF1
NPHP3_N
TraI_hel_assoc_N
AAA_16
HTH_IclR
nSTAND3
PhoH
DEAD
AAA
TrwB_AAD_bind
ABC_tran
UvrD_C
SLFN-g3_helicase
ATPase_2
DUF87
Motif
Other DBs
NCBI-ProteinID:
WLW54852
LinkDB
All DBs
Position
6150671..6152923
Genome browser
AA seq
750 aa
AA seq
DB search
MSSQAGSQGGGERRLAVLEGVLERITYANEENGYTVARVDTGRGGGDLLTVVGALLGAQV
GESLRMEGRWGSHPQYGKQFTVENYTTVLPATVQGIRRYLGSGLVKGIGPVFADRITQHF
GLDTLQIIEEEPKRLIEVPGLGPKRTKKIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIY
KKYGDASISVVKNRPYRLASDVWGIGFLTADKIAQSVGIPHDSPERVKAGLQYALSQSTD
QGHCYLPEEQLIADAVKLLQVDTGLVIECLAELALPDEESGEPGVVREKVPGEQGEEVTA
VYLVPFHRAELSLSAQLMRLLRTEQDRMPAFRDVAWDKALGWLKTRTGTDLAPEQEAAVR
LALTEKVAVLTGGPGCGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLAELTGADASTV
HRLLELKPGGDAAYDKDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQL
PSVGAGEVLRDLLADGGPVPAVRLTRVFRQAQQSGVVTNAHRINAGQHPVTDGMKDFFLF
VEDDTEEVGRLTVDVAARRIPARFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAITPGR
PDLAEKRFGGRVFRVGDKVTQIRNNYEKGTNGVFNGTVGVVTSLDPVDQRLTVLTDEDEE
VAYEFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTSAWMMLQRNLLYTAVTRAKKLVVL
VGSRKAIGQAVRTVSAGRRCTALDFRLAGL
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcaggcggggagccaggggggcggcgagcggcggctcgccgtgctcgaaggt
gtcctggagcggatcacgtacgccaacgaggagaacggctacacggtcgcccgggtcgac
accggccgcggtggcggcgacctgctgaccgtcgtcggcgcgctgctcggcgcccaggtc
ggcgagtccctgcggatggagggccgttggggctcccatccccagtacggcaagcagttc
accgtggagaactacacgacggtcctgccggccaccgtccagggcatccgccgctacctc
ggctcaggcctggtcaagggcatcggcccggtcttcgccgaccgcatcacccagcacttc
ggcctggacaccctccagatcatcgaggaggaaccgaagcggctcatcgaggtgcccggc
ctcggccccaagcggaccaagaagatcgccgacgcctgggaggagcagaaggcgatcaag
gaggtcatgctcttcctccagaccgtcgaggtgtccacgtcgatcgcggtccgcatctac
aagaagtacggcgacgcctcgatctccgtggtgaagaaccgtccctatcggctcgcctcc
gacgtctggggcatcggctttctcaccgccgacaagatcgcccagtccgtcggcatcccg
cacgacagcccggagcgggtgaaggccggtctccagtacgccctgtcgcagtccaccgac
cagggccactgctacctccccgaggagcagctgatcgccgacgcggtcaagctcctccag
gtcgacaccggcctggtcatcgagtgcctcgccgaactcgccctgcccgacgaggagtcc
ggcgagcccggcgtcgtacgcgagaaggtcccgggggagcagggcgaagaggtcacggcc
gtctacctcgtccccttccaccgcgccgaactctccctctccgcccagctgatgcgcctg
ctgcgcaccgagcaggaccggatgccggcgttccgggacgtggcctgggacaaggcgctc
ggctggctgaagacccgcaccgggaccgacctcgcccccgaacaggaggccgccgtcagg
ctcgcgctgaccgagaaggtcgccgtgctcaccggcggcccggggtgcggcaagtccttc
acggtccgctcgatcgtggagctggcccgcgccaagaaggccaaggtggtcctcgccgcc
cccacgggccgcgccgccaagcgcctggccgaactcaccggcgccgacgcctccaccgtc
caccgcctcctggagctgaaaccaggcggcgatgcggcctacgacaaggaccgacccctg
gacgccgacctggtggtggtcgacgaggcgtccatgctggacctgctgctcgccaacaaa
ctggtgaaggccgtccccccgggcgcgcacctgctcttcgtcggggacgtcgaccaactc
cccagcgtcggcgccggcgaggtcctccgcgacctgctcgccgacggcggccccgtcccc
gccgtacgcctcacccgtgtcttccgccaggcccagcagtcgggtgtggtgacgaacgcg
caccggatcaacgcgggacagcaccccgtcaccgacggcatgaaggacttcttcctcttc
gtcgaggacgacaccgaggaggtcggccggctcaccgtggacgtggcggcccgtcggatt
ccggccaggttcggcctcgacccgcgccgggacgtccaggtgctcgcccccatgcaccgc
ggccccgcgggcgccggcaccctcaacggcctgctccagcaggccatcaccccgggccga
ccggacctcgccgagaaacgcttcggcggccgggtcttccgggtcggcgacaaggtcacc
cagattcgcaacaattacgagaagggcaccaacggtgtcttcaacggcaccgtgggcgtg
gtcacctcgctcgacccggtcgaccagcgcctgacggtgctgaccgacgaggacgaggag
gtggcgtacgagttcgacgaactggacgaactggcccacgcgtacgcggtgaccatccac
cgctcccagggcagcgagtacccggccgtggtgatcccggtcaccaccagcgcctggatg
atgctgcagcggaacctgctgtacacggcggtcacccgcgccaagaagctggtcgtcctc
gtcggttcccgcaaggcgatcggccaggcggtgcgcacggtgtcggcggggcgccgctgc
acggccctggacttccggctcgcgggtctgtga
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