Streptomyces coralus: QU709_32890
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Entry
QU709_32890 CDS
T09650
Name
(GenBank) ATP-dependent helicase C-terminal domain-containing protein
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
scoa
Streptomyces coralus
Brite
KEGG Orthology (KO) [BR:
scoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scoa03019
]
QU709_32890
Enzymes [BR:
scoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QU709_32890
Messenger RNA biogenesis [BR:
scoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QU709_32890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
AAA_25
Helicase_RecD
nSTAND3
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WLW55846
LinkDB
All DBs
Position
complement(7366282..7368921)
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AA seq
879 aa
AA seq
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MIRYDALDALPVRSALDGLDDSLEGHGTAVLVAPPGTGKTTLVPLSMAGLLDDGSPARRV
VVAEPRRIAARAAARRMAWLLGEKVGESVGYTVRGERVVGRHARVEVVTTGVLLQRLQRD
PELTGVDVVVLDECHERHLDADTVAAFLWDVRETLRPELRLVAASATTDAQGWARLLGGA
PVVEARGTSYPVEVVWAPPARPVRPPHGIRVDPLLLTHVASVVRRALAERDGDVLCFLPG
VGEIARVAGQLGALGEVDVLQVHGRAPAAVQDAVLAGGERRRVVLATAVAESSLTVPGVR
VVVDSGLAREPRVDHARGLSALATVRASQAAGRQRAGRAGREAPGAVYRCWAEAEDARLP
RFPSPEIKVADLTAFALQAACWGDPEAAGLALLDPPPAGAMAAARAALAGVGAVDSAGRA
TERGARLARLGLHPRLGRALLDTSGAGAEVVALLSEEPPRDYGDDLAAAVRTARRGGDAY
AGRWRSEVQRLRAVSKQAARATEGPPDTSGGPTDSDAARSKGTEASERTDTTAGQSAAPG
AGGPADPHTGALVAPGVDRLAGLVAALAFPERVARGVGGSYLMASGTRAELAEGSPLRGA
PWIAVAVADRPVGKGHARVQLAAVIDEDLARSAAAALRSERQEVHWADGDVVARRVDRLG
AIELTARPLRNADPALVREALLEGLRQEGFGLLRWTPEAAVLRQRLAFVRLHLGEPWPDV
SDEALHARVDEWLEPELGRARRRADLARIDAGAALNRLLPWASGEAARLDELAPERMAVP
SGSRIRIDYGSPEQPVLAVKVQEMFGLQESPRIAGVPLLVHLLSPAGRPAAVTADLASFW
RDGYKGVRAELRGRYPKHPWPEDPATAEPTRFTNARLRR
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgttacgacgcgctggacgcccttcccgtacgcagtgccctcgacggcctggac
gactccctggagggacacggcacggccgtcctggtggcgcctcccggcacgggcaagacg
accctggtcccgctctccatggcgggtctgctggacgacggctcgcccgcgcggcgggtc
gtcgtcgccgagccgcggcggatcgcggcccgcgccgccgcccggcgcatggcctggctg
ctgggcgagaaggtgggcgagagcgtcggctacaccgtgcgcggcgaacgggtggtcggg
cgccacgcgcgcgtggaggtcgtcacgacgggtgtgctgctccagcggctgcaacgggac
ccggagctgaccggcgtcgacgtggtggtgctggacgagtgccacgaacggcatctggac
gcggacaccgtggcggcgttcctgtgggacgtgcgcgagacgctccggcccgagctgcgg
ctggtggccgcgtcggcgacgaccgacgcacagggctgggcccggctgctgggcggcgcc
ccggtggtcgaggcgcggggtacgtcgtatcccgtggaggtggtgtgggcgccgccggcg
cgcccggtacggccgccgcacgggatacgggtggatccgctgctgctgacgcatgtggcg
tcggtggtgcggcgggcgctggccgagcgggacggggacgtgctgtgcttcctgcccggc
gtgggcgagatcgcgcgggtcgccgggcagctgggcgccctcggtgaggtggacgtgctc
caggtgcacgggcgggcccctgccgccgtgcaggacgcggtgctggccggcggtgagcgg
cgccgcgtggtgctggcgaccgcggtggcggagtcgtcgctgacggtgccgggtgtgcgg
gtcgtggtggactcggggctggcgcgggagccgcgagtggaccacgcgcgcgggctgagc
gcgctggccacggtgcgggcctcgcaggcggcgggacggcagcgggcgggacgagccggg
cgtgaggcgcccggcgccgtgtaccggtgctgggcggaggcggaggacgcccgtctgccg
cgttttccctcccccgagatcaaagtggccgacctgacggcgttcgccctccaggcggcc
tgctggggcgatcccgaggccgccgggctggcgctgctggatccgccgccggccggggcg
atggccgcggcacgggccgctctcgcgggagtgggcgcggtggactccgccggccgggcc
acggaacgcggcgcgcggctggcccggctggggctgcacccccgtctggggcgcgccctg
ctggacacctccggcgcgggagccgaggtggtcgccctcctgtcggaggagccgccccgg
gactacggcgacgacctggccgccgccgtacggaccgcccggcgcgggggtgacgcctac
gcgggccgctggcggtcggaggtacagcggctgcgcgcggtctcgaagcaggctgcccgc
gccaccgagggtccgccggacacgagtggtgggccgacggattccgacgcggctcggtcg
aagggcaccgaagcgagcgagcggacggacaccaccgcgggccagtcggcagcccccggc
gcgggcggaccggcagacccccatacgggcgccctcgtggcccccggtgtcgaccggctc
gccgggctcgtcgccgccctcgcctttcccgagcgcgtcgccagaggggtgggtggctcc
tatctcatggcgtccgggacgcgggccgagctggccgagggctccccgctccggggcgcc
ccctggatcgccgtggccgtggcggaccggcccgtggggaaggggcacgcgcgcgtgcag
ctcgccgcggtgatcgacgaggacctggcccggtcggcggcggcagccctgcgttccgag
cggcaggaggtccactgggcggacggggacgtcgtggcccggcgcgtggatcggctcggg
gcgatcgagctcaccgcacggccgttgcggaacgccgaccccgccctcgtacgcgaggca
ctgctcgaagggctgcggcaggaggggttcgggttgctgcggtggacgcccgaggcggcc
gtactgcggcagcggctcgcgttcgtgcgtctgcacctgggggagccctggcccgatgtc
tccgacgaggcgctgcacgcgcgcgtggacgagtggctggagccggagctggggcgggcc
cggcggcgggccgacctggcgcggatcgacgccggggcggcactgaacaggctcctcccc
tgggcctccggggaggccgcgcggctcgacgagctggcgccggagcggatggccgtaccg
agtgggtccaggatccggatcgactacggcagccccgaacagccggtgctcgccgtgaag
gtgcaggagatgttcgggttgcaggagtcaccgcggatcgccggtgtgccgctgctcgtt
catctcctctcccccgccgggcgccccgcggccgtcaccgccgacctcgcgtccttctgg
agggacggctacaagggcgttcgggcggaactgcgcggccggtatccgaagcatccctgg
ccggaggatccggcgaccgcggagccgacgcggttcaccaacgcgcggctcaggcggtga
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