Streptomyces coralus: QU709_43115
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Entry
QU709_43115 CDS
T09650
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scoa
Streptomyces coralus
Brite
KEGG Orthology (KO) [BR:
scoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scoa03021
]
QU709_43115
Transcription machinery [BR:
scoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QU709_43115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_38
HTH_Crp_2
MarR
MarR_2
Sigma70_ECF
IF2_N
GerE
HTH_27
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
WLW57753
LinkDB
All DBs
Position
complement(9671241..9672131)
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AA seq
296 aa
AA seq
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MDTAVIRSEAQVVAQTAGTRTTGDGPLPGVGDPKTVAPRDARELSRQFFQRMAVLEEGTH
EYQYARNTLIEMNMSLVRFAAGRFRGRGDDMEDIVQTGMIGLIKAIDRFELAREVEFTSF
ALPYIVGEIKRFFRDTTWAVHVPRRLQELRVELAKAREELASRLDREPTVAELATLMNIS
ENEVIEAQIASNGYNSSSLDAALTGDGPEGGEAVLADFIGVEEDGLRLVEDFQSLAPLMA
ELSDRDRQIIHMRFVEEATQAEIGERLGCSQMHVSRLIKRIITRLREGMLGELGCA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgccgtgatccggtcggaggcacaggtcgtcgcgcagaccgccgggaccagg
acgacgggtgacggaccgctgcccggagtcggggaccccaagaccgtggcccccagggac
gcccgtgagctgtcccgccagttcttccagcgcatggccgtactcgaagaaggcacgcac
gagtaccagtacgcccgcaacacgctcatcgagatgaacatgtccctcgtgcggttcgcg
gcaggccggttccgcggccgcggcgacgacatggaggacatcgtccagaccgggatgatc
ggcctgatcaaggccatcgaccggttcgagctggcccgcgaggtcgagttcacgtcgttc
gcgctgccctacatcgtcggcgagatcaagcggttcttccgggacaccacctgggccgtg
cacgtgccgcgccggctccaggagctgcgtgtggagctggccaaggcccgcgaggagctg
gccagccggctggaccgggagccgacggtcgccgagctcgccacgctgatgaacatctcg
gagaacgaggtgatcgaggcgcagatcgcctccaacggctacaactcctcgtccctggac
gccgcgctcaccggtgacggccccgagggcggcgaggcggtcctcgccgacttcatcggc
gtcgaggaggacgggctgcggctcgtggaggacttccagtccctcgccccgctgatggcg
gagctgagcgaccgcgaccggcagatcatccatatgcggttcgtggaggaggccacgcag
gcggagatcggtgagcggctcggctgctcgcagatgcatgtctcccggctgatcaagcgg
atcatcacacggctgcgcgaggggatgctgggcgagctgggctgcgcctga
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