Streptomyces coeruleorubidus: CP976_01525
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Entry
CP976_01525 CDS
T07302
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
scoe
Streptomyces coeruleorubidus
Pathway
scoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP976_01525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scoe03021
]
CP976_01525
03019 Messenger RNA biogenesis [BR:
scoe03019
]
CP976_01525
Transcription machinery [BR:
scoe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CP976_01525
Messenger RNA biogenesis [BR:
scoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CP976_01525
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
DUF3086
AAA
AAA_22
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QEV22985
UniProt:
A0A5J6I297
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All DBs
Position
305270..306412
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AA seq
380 aa
AA seq
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MTTTLDTPPAQQQTEPRTALGVLDIDASGKGHLRGENCLPAPTDPAVSPALIRRHGLRKG
DLVEGTLGDRRGLTDVARVDGRTPADLRGRRHFRDLTPLHPHERLRLENPAAGLAGRVVD
LITPVGKGQRGLLVAPPKTGKTVILQQLAAAVTGNHPECRLMVLLLDERPEEVTDMRRSV
RGEVYASTFDRSAKQHIALAELVIERAKRLVEAGEDVVILLDSLTRLCRAHNNAAASGGR
ILTGGVDASALTGPKRFFGAARSAEEGGSLTILATALVETGSRADDFYFEELKSTGNMEL
RLSREPASRRVFPAVDIIPSGTRREELLLPPAELAAVHGLRRVLQNRDGQGALETLLERM
RDTPDNATFLRRIQPTLPSD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacactcgacacccctcccgcccagcagcagaccgagccccggaccgccctc
ggcgtcctcgacatcgacgcgagcgggaagggtcacctgcgcggcgagaactgcctgccc
gcgcccaccgaccccgcggtctcccccgccctgatccgccgccacggcctgcgcaagggc
gacctcgtcgaaggcaccctgggcgaccggcgcggcctcaccgacgtcgcacgggtcgac
ggccgtacaccagcggacctgcgcggccgccggcacttccgggacctgacgcccctgcat
ccgcacgagcgcctccgcctcgaaaacccggccgccggcctggccggtcgggtcgtcgac
ctgatcacgccggtcggcaagggccagcgcgggcttctcgtggccccgcccaagaccggc
aagaccgtcatcctccagcagctcgcggccgccgtcaccggcaaccatcccgagtgccgg
ctgatggtgctgctgctcgacgagcggcccgaggaggtcaccgacatgcggcgcagcgtg
cggggcgaggtgtacgcctcgaccttcgaccggagcgccaaacagcacatcgcgctcgcc
gagctcgtgatcgagagggccaagcggctcgtcgaggccggcgaggacgtcgtgatcctc
cttgattccctcacccggctgtgccgggcgcacaacaacgcggccgcctccggaggccgc
atcctcaccggcggagtcgacgcgtccgcgctgaccggccccaagcgcttcttcggagcc
gcccggtcggccgaggagggcggttcgctcacgatcctcgcgacggcactggtggagacc
ggttcccgggcggacgacttctacttcgaggagctgaagagcacgggcaacatggagctc
cgcctgagccgcgagccggcgtcccgccgtgtgttcccggccgtcgacatcatcccctcc
ggcacccgtcgcgaggaactcctgctgcccccggccgagttggcggccgtacacgggctg
cggcgcgtgctccagaaccgggacgggcagggcgccctggagaccctcctggaacgcatg
cgcgacaccccggacaacgcgacgttcctgcggcgcatccagccgacgctgccctcggac
tga
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