Streptomyces coeruleorubidus: CP976_06230
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Entry
CP976_06230 CDS
T07302
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scoe
Streptomyces coeruleorubidus
Pathway
scoe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CP976_06230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scoe03400
]
CP976_06230
Enzymes [BR:
scoe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CP976_06230
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CP976_06230
DNA repair and recombination proteins [BR:
scoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CP976_06230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_IS1595
Zn_ribbon_8
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QEV23780
UniProt:
A0A5J6HZH5
LinkDB
All DBs
Position
complement(1385799..1386584)
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AA seq
261 aa
AA seq
DB search
MPELPDVEGFRQVLESCAKGRVVRHVEVRDAGVLHGVGVRGLRDALEGRRFGTPERHGKW
LLARTGGPTLVLHFGMTGRLVCGRPDDAVEAHDRVLFTLSGNRQLRFRDQRKLQGLWLAR
DDSDLDRLLGRQGPDAMAVDRADFEAVLSSRRGHLKTALTDQSALAGLGNLLADEILWRA
RLRPDRLARELTQDDRRRLYSEMRRTLRSAVSAGCVPPRDSWLTGHRDDPDPRCPRCGSG
LRRSRMAGRGTVWCPRCQPEG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgatgtcgagggcttccgtcaggtgctcgagtcctgtgcgaaggga
cgggtcgtgcggcatgtcgaggtgcgggacgcgggcgtcctgcacggggtcggggtccgg
ggcctgcgtgacgcgctggagggccgccgcttcggcaccccggagcggcacggcaagtgg
ctgctcgcccgcaccggcggccccaccctggtgctgcacttcggcatgaccgggcggctg
gtctgcggtcgtcccgacgatgccgtcgaggcccacgaccgggtgctgttcaccctgagc
ggcaaccgtcagctgcgcttccgggaccagcgcaagctccaaggcctgtggctggcccgc
gacgactccgacctcgaccggctgctggggcggcagggccccgacgcgatggcggtggac
cgcgcggatttcgaggccgtgctctcgtcgcgccgagggcacctgaagaccgcgctcacc
gaccagtccgccctggccggcctcggcaatctgctcgccgacgagatcctgtggcgtgcc
cggctgcgccccgaccgcctggcgcgtgagctcacccaggacgaccgccgccgcctgtac
agcgagatgcgcagaaccctgcggtccgccgtcagcgccggctgcgtgccgccgcgggac
tcctggctcacgggacaccgtgacgaccccgaccccaggtgcccgcgctgcggcagcggt
ctgcgccggtcccgcatggcgggccgcggcacggtgtggtgcccccggtgtcagccggag
gggtga
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integrated database retrieval system