Streptomyces coeruleorubidus: CP976_11950
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Entry
CP976_11950 CDS
T07302
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scoe
Streptomyces coeruleorubidus
Pathway
scoe03030
DNA replication
scoe03430
Mismatch repair
scoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP976_11950
03430 Mismatch repair
CP976_11950
03440 Homologous recombination
CP976_11950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scoe03032
]
CP976_11950
03400 DNA repair and recombination proteins [BR:
scoe03400
]
CP976_11950
Enzymes [BR:
scoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP976_11950
DNA replication proteins [BR:
scoe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CP976_11950
DNA repair and recombination proteins [BR:
scoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CP976_11950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Tsr1_G-like
Motif
Other DBs
NCBI-ProteinID:
QEV24807
UniProt:
A0A5J6I768
LinkDB
All DBs
Position
complement(2560247..2563786)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHTAQKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTMWAVNKTGLHNLFRL
SSDAYAEGWLQKWPRMDKETIAKWSEGIVASTGCPSGEVQTRLRLGHFDEALKAAADYQD
IFGKDRYFLELMDHGIEIEHRVRDGLLEIAKKLGIPPLVTNDSHYTYSHEASAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSDAWQEGCANTRLIAEMVDTTGMFEKRD
LMPKFDIPEGYTEVSWFREETLRGMHRRFPDGIPDDRMKQVEYEMDTIISMGFPGYFLVV
ADFIMWAKKQGIAVGPGRGSAAGSIVAYALGITDLDPIPHGLIFERFLNPERISMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGTIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGINLDGITNPEHPRYSEAGEIRAMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSETITDHVPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKS
NKGIDIDLLSLPLDDPTTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNGQQDITPIHPELEEPLREVLDVTHGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFVLFQEGARKKGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANHPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPDVNES
MSNFAAQGDDVILFGLSAVRNVGTNVVESIIRCRKAKGKYTSFPDYLDKVEAVVCNKRTT
ESLIKAGAFDAMGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEEQSDEPGFGL
DVEFTTEEWDKTYLLAQEREMLGLYVSDHPLFGLEHILSDKADAGISQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELQVPDLSNAGTNAPVVLTIPATRVTPPLVSRLGEVLSHHKGDSEVRI
RLQGPTKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcaacgcgtgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctccacggggcgtacgacttcttccacacggcgcagaaggcc
ggggtcacgccgatcatcggcatcgaggcgtacgtcgcgcccgagtcgcgccgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgggacgacgtctccggctccggtggc
tacacccacaagacgatgtgggccgtgaacaagacgggcctgcacaacctcttccgcctc
tcctcggacgcgtacgccgagggctggctgcagaagtggccccgcatggacaaggagacc
atcgccaagtggtccgagggcatcgtcgcctccaccggctgcccctccggcgaggtccag
acccggctgcgcctcggccacttcgacgaggccctcaaggccgccgccgactaccaggac
atcttcggcaaggaccgctacttcctggagctgatggaccacggcatcgagatcgagcac
cgggtccgcgacggcctgctcgagatcgccaagaagctcggcatccccccgctggtcacg
aacgactcccactacacctactcgcacgaggcgagcgcgcacgacgccctgctgtgcatc
cagaccggcaagaacctctccgaccccgaccgcttcaggttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
gccaacacccggctgatcgccgagatggtcgacaccacgggcatgttcgagaagcgcgac
ctgatgcccaagttcgacatccccgaggggtacacggaggtcagctggttccgcgaggag
accctgcgcggcatgcaccgccgcttcccggacggcatcccggacgaccgcatgaagcag
gtcgagtacgagatggacaccatcatctcgatgggcttcccgggctacttcctcgtggtc
gccgacttcatcatgtgggccaagaagcagggcatcgcggtcggccccggccgaggctcc
gcggccggctcgatcgtcgcctacgccctcggcatcaccgacctcgaccccatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcatctccatgcccgatgtcgacatc
gacttcgacgagcgccggcgcgtcgaggtgatccggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacgtacggcaccatcaaggccaagaacgcgatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggcgaccgcctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcaacctcgacggcatcaccaaccccgagcacccccgc
tactcggaggcgggcgagatccgggcgatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccgccagatgggcgtccacgccgccggc
gtgatcatgtccagcgagaccatcaccgaccacgtcccggtctgggtcaggcacaccgac
ggcgtgaccatcacgcagtgggactacccgagctgtgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctgacgatcatggacgacgccgtcaagatggtgaagtcc
aacaaggggatcgacatcgatctcctgagcctcccgctcgacgaccccacgaccttcgaa
ctgctccagcgcggcgacaccctcggcgtcttccagttcgacggcggccccatgcgctcc
ctgcttcggctgatgaagccggacaacttcgaagacatctccgccgtgtcggccctgtac
cgcccgggcccgatgggcatgaactcccacacgaactacgccctgcgcaagaacgggcag
caggacatcacgcccatccaccccgagctggaggagccgctcagggaggtcctggacgtc
acccacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgcgggc
tactcgctcggcgaggccgacatcctccgccgcgtgatgggcaagaagaagcccgaggaa
ctggccaagaacttcgtgctgttccaggagggcgcccgcaagaagggctacagcgacgag
gccatccaggcgctgtgggacgtgctggtccccttcgccggctacgcgttcaacaaggcg
cactccgccgcgtacggactcgtctcgtactggacggcgtacctcaaggcgaaccacccc
gccgagtacatggccgcgctcctcacgtccgtgaaggacgacaaggacaagtcggccgtc
tacctcaacgagtgccgccgcatgggcatcaaggtgctcccgccggacgtcaacgagtcg
atgtccaacttcgccgcccagggcgacgacgtgatcctcttcggcctctccgccgtccgc
aacgtcggtacgaacgtcgtcgagtcgatcatcaggtgccgcaaggccaaggggaagtac
acctcgttcccggactacctcgacaaggtggaggcggtggtctgcaacaagcgcaccacc
gaatcgctgatcaaggccggcgccttcgacgccatgggccacacccgcaagggcctgacc
gcgcagtacgaaccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggcggcatgggggaggagcagagcgacgagccgggcttcgggctc
gacgtggagttcaccaccgaggagtgggacaagacctatctgctcgcccaggagcgggag
atgctcggtctgtacgtctccgaccacccgctgttcggtctggagcacatcctgtccgac
aaggccgacgcgggcatctcccagctcaccggcggtgagcacgcggacggcgcggtcgtc
accatcggcggcatcatctccggcctccagcgcaagatgaccaagcagggcaacgcctgg
gccatcgccaccgtcgaggacctcgccggctcgatcgagtgcatgttcttcccggcgacc
taccagctcgtctcgacccaactcgtcgaggacgccgtggtgttcgtcaagggccgactc
gacaagcgcgaggacgtgccgcggctggtcgcgatggagttgcaggtccccgacctgtcg
aacgcgggcaccaacgcgcccgtcgtactgaccatcccggccacgcgggtgaccccgccg
ctggtcagccggctcggcgaggtcctcagccaccacaagggcgacagcgaggtccggatc
aggctccaggggccgaccaagacgaccgtgctgcgtctggaccggcaccgggtgaagccg
gacccggcgctcttcggcgacctgaaggtgctgctcgggccgtcctgcctggcgggctga
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