Streptomyces coeruleorubidus: CP976_17875
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Entry
CP976_17875 CDS
T07302
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
scoe
Streptomyces coeruleorubidus
Brite
KEGG Orthology (KO) [BR:
scoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scoe03021
]
CP976_17875
Transcription machinery [BR:
scoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP976_17875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_24
HTH_Crp_2
HTH_3
MarR_2
HTH_28
HTH_31
GerE
MarR
DUF7343
IF2_N
KORA
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
QEV30380
UniProt:
A0A5J6IHU6
LinkDB
All DBs
Position
3887888..3888802
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AA seq
304 aa
AA seq
DB search
MSPRLDASRTQEATSTPPPEHLDPIEQVETLVTPDDLLAGLPDIPPYEEVGAVDARALSK
TLFERLESLEEGTHEYSYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKAI
DRFELSRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQKLDR
APTVTELAERLGISNDEVVEGMAASNAYTASSLDAQPEEDDSEGALADRIGYEDHGLEGI
EYVESLKPLIAELPPRDRKILSLRFVAGMTQSEIGEELGISQMHVSRLLSRTLVRLRKGL
TVEE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgcatcgcgtacccaggaagcgacgtcgacaccccctccggaa
catctggatcccatcgagcaggttgagacgctcgtcacaccggacgaccttctcgccgga
cttccggacatccccccgtacgaggaagtcggcgcggtcgacgcacgggccctgtccaag
accctcttcgagcgcctcgaatcgctggaggaaggcacccacgagtactcgtacgtccgc
aacacgctcgtcgaactgaacctcgcactggtcaagttcgccgcctcccggttccgctcc
cgcagcgagccgatggaggacatcatccaggtcggcaccatcggcctgatcaaggcgatc
gaccgcttcgagctgtctcggggtgtcgagttccccactttcgcgatgccgaccatcgtc
ggcgagatcaagcgcttcttccgcgacacctcgtggtccgtgcgcgttccgcggcggctc
caggagctgcggctcgacctggccaaggccggtgacgagctggcccagaagctggaccgc
gccccgacggtgaccgagctggccgagcgcctcggcatctccaacgacgaggtcgtcgag
ggcatggccgcgtcgaacgcctacaccgcctcctcgctggacgcccagccggaggaggac
gactccgagggcgccctcgcggaccgcatcggctacgaggaccacgggctcgaaggcatc
gagtacgtcgagtcgttgaagccgctgatcgccgaacttcccccgcgtgaccggaagatc
ctgtcgctgcgcttcgtcgcgggcatgacccagtcggagatcggcgaggaactgggcatc
tcccagatgcacgtgtcgcgtctgctgtcccggacgctggtacggctgcgcaaggggctg
actgtcgaggagtga
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