Streptomyces coeruleorubidus: CP976_19780
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Entry
CP976_19780 CDS
T07302
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
scoe
Streptomyces coeruleorubidus
Brite
KEGG Orthology (KO) [BR:
scoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scoe03016
]
CP976_19780 (thpR)
Enzymes [BR:
scoe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CP976_19780 (thpR)
Transfer RNA biogenesis [BR:
scoe03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CP976_19780 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Imm32
aGPT-Pplase3
Motif
Other DBs
NCBI-ProteinID:
QEV26155
UniProt:
A0A5J6IBN1
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All DBs
Position
complement(4299081..4299653)
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AA seq
190 aa
AA seq
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MRLFAAVLPPDEVCRELGGVVDELRALPGADGMRWTGRPGWHFTLAFYGEVDDGLVPELA
ERLERAARRTEPFSLAVRGGGQFGHGKALWAGADGDLAALRLLAERAEAAARKAGVPMGE
HRRYKAHLTVARKREAGDVRAFLDALAGFTGRTWTVRELCLVRSNLPTSGVPGEQPRYEA
VGRWPLGGAG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgcggccgtgctgccccctgacgaggtgtgtcgtgaactcggcggtgtg
gtcgacgagttgcgcgcgctgcccggcgccgacggcatgcgctggaccggccgtccgggc
tggcacttcacactcgccttctacggtgaggtcgacgacggtctggtccccgagctggcg
gagcggctggagcgggccgcgcgccggaccgagccgttctcgctggccgtgcggggtggc
gggcagttcgggcacgggaaggcgctgtgggccggggccgacggggacctggcggccctc
cggctgctggccgagcgggccgaggcggccgcgcgcaaggccggggtgccgatgggggag
caccggcggtacaaggcccatctgaccgtggcgcggaagcgggaggcgggggacgtgcgg
gcgttcctggacgcgctcgcgggattcacgggccggacctggaccgtgcgggagctctgc
ctggtgcggagcaatctgccgacgtcgggggtcccgggagagcagccccggtacgaggcg
gtcgggcgctggcctctcggcggcgccggttag
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