Streptomyces coeruleorubidus: CP976_34155
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Entry
CP976_34155 CDS
T07302
Name
(GenBank) rhamnogalacturonase B precursor
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
scoe
Streptomyces coeruleorubidus
Brite
KEGG Orthology (KO) [BR:
scoe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CP976_34155
Enzymes [BR:
scoe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CP976_34155
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Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
QEV28669
UniProt:
A0A5J6I960
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All DBs
Position
complement(7399326..7400987)
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AA seq
553 aa
AA seq
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MSGSSKRPVGRRAFVLGATAAAGTALTGTAHAAGFGWTDDGSDYVVDTGAQLVLKVSKST
GDLTSLVYRGTEYQGYGGMNSHIESGLGASTVSIRQSGSTILVSVTHGTLRHYYAARNGE
NNVYLWTNKADTSVSATRYIVRVKKGAFLNDEPDSYTYAPTAIEASDVFRKSDGQTRSKH
YSKRRVMDYDHIGWSAGGVGLWMVRSNHEKASGGPFYRSLLRHQSADGGGLYEILYYGQN
QTEDQRFGLQGPYVIAFTDGGAPSSALFPGTLTTPWADSLGIPGYVPASGRGKVTGVGIS
GRNTAYPYTVGLANAAAQYWGSARSSDGYFSVPGVLPGTYTLTVFKGELAVYTTPVSVSA
GGTTTLNTIAIPASNDPSHASAIWRIGDWNGTPGGFKNADLMTYAHPSDVRAASWTGNVV
IGDGETAAFPCYLWKDVNSGILVYFRLTAAQAAAAHTLRIGVTTAYANGRPQVTVNDAWT
SAAPAPPTQPNTRSLTNGSYRGNNHTFTYTVPASAWKTDPSQYNVLRIDVVSGSGATGFL
SAGTAVDAIDLLA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatcctcgaagagaccggtcggccgccgcgccttcgtcctcggcgccaccgcc
gccgccggcacggccctcaccggcacggcgcacgcagccggcttcggctggaccgacgac
ggctcggactacgtcgtcgacaccggcgcccaactggtcctcaaagtcagcaagtccacc
ggcgacctgacctccctggtctaccggggcacggagtaccagggctacggcggcatgaac
tcacacatcgagtccggcctcggcgcctccaccgtgagcatcaggcagtccggctcgacg
atcctggtctcggtcacgcacggcacgctcaggcactactacgcggcccgcaacggcgag
aacaacgtctacctgtggacgaacaaggccgacacgtccgtctccgccacccggtacatc
gtgcgcgtgaagaagggcgccttcctcaacgacgagcccgactcgtacacatacgccccc
accgccatcgaggcctcggacgtgttccggaagtccgacgggcagacccgctccaagcac
tactccaagcggcgcgtcatggactacgaccacatcggctggtccgcgggcggcgtcggc
ctgtggatggtgcgcagcaaccacgagaaggcctccggcggccccttctaccgctccctg
ctgcgccaccagagcgcggacggcggcggcctgtacgagatcctctactacggccagaac
cagaccgaggaccagcggttcggtctccagggcccgtacgtcatcgccttcacggacggc
ggggcgccctcctccgcgctgttcccgggcacgctgaccacaccgtgggccgactcgctc
ggcatccccgggtacgtgccggcgagcggccggggcaaggtcacgggcgtcgggatatcc
gggcggaacacggcgtacccgtacacggtcgggctggccaacgcggcggcacagtactgg
ggttcggcgcgttcctcggacggctacttctccgtcccgggtgtgctgccggggacgtac
acgctgaccgtcttcaagggcgagctggcggtgtacaccacgccggtgagcgtgtcggcg
ggcggcacgaccaccctgaacacgatcgccatcccggcctccaacgacccgtcccacgcg
agcgcgatctggcggatcggcgactggaacggcacgccgggcgggttcaagaacgccgac
ttgatgacgtacgcgcatccgtccgacgtgcgggccgcgtcctggaccgggaacgtcgtc
atcggcgacggcgagaccgcggccttcccctgttacctctggaaggacgtcaacagcggg
atcctggtgtacttccggctgacggcggcccaggcggccgccgcgcacaccctgcggatc
ggggtgacgacggcgtacgccaacggccgcccgcaggtgacggtgaacgatgcctggacc
tccgccgcccccgccccgcccacccagccgaacacccggtcactgaccaacggttcgtac
cgcggcaacaaccacacgttcacgtacaccgtcccggcgtccgcctggaagacggacccg
agtcagtacaacgtgctcaggatcgacgtggtgagcgggtcgggggcgaccggcttcctc
agtgcggggacggcggtcgacgcgatcgacctgctggcctag
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