Staphylococcus cohnii: BZ166_08300
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Entry
BZ166_08300 CDS
T05008
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
scoh
Staphylococcus cohnii
Pathway
scoh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scoh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BZ166_08300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scoh03021
]
BZ166_08300
03019 Messenger RNA biogenesis [BR:
scoh03019
]
BZ166_08300
Transcription machinery [BR:
scoh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BZ166_08300
Messenger RNA biogenesis [BR:
scoh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BZ166_08300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_25
ATPase_2
Mor
AAA
Motif
Other DBs
NCBI-ProteinID:
AQM41476
LinkDB
All DBs
Position
1753019..1754335
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AA seq
438 aa
AA seq
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MPDKVRTSPQYESFHELYKNYTTKDLTQKAKSLKLTNYSKLNKKELVLAIMEAQMEKDGN
YYMEGILDDIQQDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEK
YYGLLQVDFVNDENAEEVKKRPHFQALTPLYPEERIKLETTKENYSTRIMDLITPIGLGQ
RGLIVAPPKAGKTSLLKEIANAIASNKPDAELFVLLVGERPEEVTDIERSVESAEVVHST
FDEPPQHHVKVAELLLERAKRLVEIGKDVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSMTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLAE
RRVFPAIDIGRSSTRKEELLIPPKDLESLWQLRNMFTDSLDFTERFVRKLKRTKTNQEFF
EQLQQAAKESTKTGKPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctgataaagtacgaacatcacctcagtacgaatcgttccacgagttatataaaaat
tacactactaaagatctcactcaaaaagcaaaatcactgaaattaacaaactatagtaaa
ttaaataaaaaagagttagttcttgcaattatggaagcccagatggaaaaagatggcaac
tattatatggaaggtatcttagatgatatccaacaagatggttatggcttcttaaggact
gtcaattattcaaaaggtgaaaaagatatttatatctctgctagccaaatacgtcgtttt
gaaattaaaagaggcgacaaagtaactggtaaagtaaggaaaccaaaggataatgaaaag
tattatggtttgctacaagtagattttgttaatgatgagaatgcagaagaagttaagaaa
agaccacatttccaagcattaacaccattatatccagaagagcgcatcaagctagaaaca
acaaaagaaaattattctacacgtattatggatttaattacgccaattggtttaggacaa
cgtggtttgattgttgccccaccaaaagctgggaaaacgtcattattgaaagaaattgca
aatgccatcgcaagcaataaacctgatgcagaattatttgtgctacttgtgggtgaaaga
ccagaagaagtaactgatattgagcgttctgtagaatcagcagaagtcgttcattcaaca
tttgatgaaccaccacagcaccatgtcaaagtagcagaattactattagaacgtgccaag
cgtttagtagaaataggtaaagatgtcattattcttatggattctattacaagacttgca
cgtgcatataacttggttatcccgccaagcggacgcacactttcaggtggtttagatcca
gcttcattacacaaacctaaggcattctttggtgctgcgagaaatattgaagctggtgga
agtatgacgatattagctactgctttagtagatacaggatcacgtatggatgacatgata
tatgaagaatttaaagggacaggaaacatggaattacaccttgatcgcaaactggctgaa
cgccgtgtctttccagctattgatattggtcgaagttctacacgtaaagaagaattacta
ataccgccaaaagatttagagtcactttggcaactacgtaacatgttcacagattcactt
gatttcacagaaagatttgtaagaaaattaaaacgtacaaaaacgaatcaagaattcttt
gaacaattgcaacaagctgccaaagaaagtactaaaactggtaagccaattatttaa
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