Staphylococcus cohnii: BZ166_09955
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Entry
BZ166_09955 CDS
T05008
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scoh
Staphylococcus cohnii
Pathway
scoh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BZ166_09955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scoh03400
]
BZ166_09955
Enzymes [BR:
scoh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BZ166_09955
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BZ166_09955
DNA repair and recombination proteins [BR:
scoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BZ166_09955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
HTH_66
DZR
Zf_2nd_IFT121
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AQM42112
LinkDB
All DBs
Position
2077533..2078405
Genome browser
AA seq
290 aa
AA seq
DB search
MPELPEVEHVTRGIRPFVKGQKIEDIMFSDKVIEGKNNNKETIIKGLSLDTFKHYTKGYT
IHNIERRSKYIVFYIENSSTQRIIISHLGMAGGFFVVDHLEDISAPNYRKHWHVIFKLDN
DKLLVYSDIRRFGEIRNVASFEGYPSFLEIAPEPFEKEALPHFMSWFDKKLYQNKPIKQM
ILDHRVVSGCGNIYACEALYRAGIHPARISKDLNYQEKEMLFYYVREVLEAGIKYGGTSI
SDYLHADGSTGTMQQHLNVYKQKTCKVCGNDIETQIIATRNSHFCPVCQK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactacctgaagttgaacatgttacaagagggataaggccttttgtaaaaggg
caaaaaattgaggatattatgttctctgataaagtgatagaaggaaaaaataataataaa
gaaacgattattaaagggttatctttagatacatttaaacattatactaaaggctacacg
attcataatattgaaagacgtagcaaatatattgttttttatattgaaaatagttcgaca
caaagaataattattagccatttaggtatggcaggtggtttttttgtcgtagatcattta
gaagatatcagtgctcccaattatcgtaaacattggcatgttatttttaaattagataat
gacaaactcttagtttactcagatattcggagatttggtgagattagaaatgttgcttca
tttgaaggatatccatcatttttagaaatcgcaccggaaccttttgagaaagaagcatta
ccacattttatgtcatggtttgataaaaaattatatcaaaataaaccaatcaaacaaatg
atattagaccatagagtagtttcaggttgtggtaatatctatgcctgtgaagcattatat
agagcaggtatccatccagcacgtatatctaaagatttaaattatcaagaaaaagaaatg
ttattttattatgttcgagaagtgttagaagcgggtattaaatatggaggtaccagtatt
tcagattatctccatgcagatggaagtacaggtacgatgcaacaacatttaaatgtatat
aaacaaaagacatgtaaagtgtgcggaaatgatattgagacacaaatcattgcaacacgt
aatagtcatttctgtcctgtatgtcaaaaatga
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