KEGG   Siccibacter colletis: KFZ77_00825
Entry
KFZ77_00825       CDS       T08544                                 
Symbol
vapC
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
scol  Siccibacter colletis
Brite
KEGG Orthology (KO) [BR:scol00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:scol03016]
    KFZ77_00825 (vapC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:scol02048]
    KFZ77_00825 (vapC)
Transfer RNA biogenesis [BR:scol03016]
 Prokaryotic type
  tRNA degradation factors
   KFZ77_00825 (vapC)
Prokaryotic defense system [BR:scol02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    KFZ77_00825 (vapC)
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: UYU32092
UniProt: A0ABY6JE45
LinkDB
Position
complement(166232..166636)
AA seq 134 aa
MLKFMLDTNICIFTIKNKPQIVRDAFNKYYGQMCISTVTLMELIYGAEKSQNPERNLAVV
EGFAARLDVLTFDNDAATHTGQIRADLAKKGTPIGAWDNMIAGHARSRGLIVVTNNTREF
ERVSGLRTEDWIAG
NT seq 405 nt   +upstreamnt  +downstreamnt
atgctcaagtttatgctggacacgaatatctgcattttcactatcaaaaataaaccgcag
atcgtgcgtgacgctttcaataaatattacggacaaatgtgcatcagcaccgtcacgcta
atggaattgatatacggcgcagaaaaatcacaaaacccggaaagaaacctggccgtcgtc
gaagggtttgctgcccgtctggatgtgcttacgtttgataacgatgccgctacgcatacg
ggtcagatccgggctgacctcgctaaaaaaggaacccctattggagcctgggacaacatg
atcgccggtcatgcgcgttcccggggcttgatcgtggtaacgaacaacacgcgggagttt
gagcgcgtgtcagggttgcgcaccgaagactggattgccggataa

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