Siccibacter colletis: KFZ77_02375
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Entry
KFZ77_02375 CDS
T08544
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scol
Siccibacter colletis
Brite
KEGG Orthology (KO) [BR:
scol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scol03016
]
KFZ77_02375 (truB)
Enzymes [BR:
scol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KFZ77_02375 (truB)
Transfer RNA biogenesis [BR:
scol03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KFZ77_02375 (truB)
Prokaryotic type
KFZ77_02375 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UYU32387
LinkDB
All DBs
Position
477407..478351
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AA seq
314 aa
AA seq
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MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQIVEERPVSFSAAQLDEALESFRGDTQ
QVPTMFSALKYQGKPLYEYARQGIVVPREARPITVYELLFIRHEGDELELEVHCSKGTYI
RTIVDDLGEKLGCGAHVIFLRRLAVSKYPIERMVTLEQLNALVEEAQARDIAPGELLDPL
LMPMDSPAADFPLVNVLPEVAVYFKNGQPVRVAGAPLNGLVRVTEGDDAKFIGMAEIDDQ
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacattcatggcgttcttttgctggataaacct
cagggtctctcctctaacgacgcgctgcaaaaagtgaagcgtttgtataacgctaaccgg
gcagggcataccggcgcgcttgacccgctggcgaccggcatgctgccgatctgtctcgga
gaagcgacaaagttttcccagtacttgcttgactccgataaacgctaccgcgttatcgca
aagctcgggcagcgtacggacacgtcggatgccgatgggcagatcgtcgaggagcgtccg
gttagcttcagcgccgcgcaactggatgaggcgctggaaagcttccggggcgacacccag
caggtgccgaccatgttttcggcgctgaaataccagggtaagccgctgtacgagtatgcg
cgtcagggaattgtggtaccgcgtgaagcgcgacccattaccgtgtacgagctgctgttc
atccgccacgaaggcgatgagcttgagctggaagtgcactgttccaaagggacctacatc
cgcaccatcgttgacgatctgggtgagaaactcggttgcggcgcgcatgttatcttcctg
cgtcgtctggcggtgagtaagtatccgattgagcgcatggtgacgctggagcagttgaat
gcgttggtcgaagaggcgcaggcgcgcgacatcgcaccgggcgagctcctcgatccactg
ctgatgccgatggacagtccggcagcggattttccgctggtgaacgtcctgcctgaggtg
gccgtatactttaaaaacggacagccggtacgcgtggcgggtgccccgttgaacgggctg
gtgcgcgttactgaaggcgatgacgcgaagtttatcggcatggcggaaatagacgatcaa
ggccgtgtcgcaccgcgtcgtctggttgttgagtatcccgcataa
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