Siccibacter colletis: KFZ77_02385
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Entry
KFZ77_02385 CDS
T08544
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
scol
Siccibacter colletis
Pathway
scol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KFZ77_02385 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scol03019
]
KFZ77_02385 (pnp)
03016 Transfer RNA biogenesis [BR:
scol03016
]
KFZ77_02385 (pnp)
Enzymes [BR:
scol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KFZ77_02385 (pnp)
Messenger RNA biogenesis [BR:
scol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KFZ77_02385 (pnp)
Transfer RNA biogenesis [BR:
scol03016
]
Prokaryotic type
tRNA degradation factors
KFZ77_02385 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
KH_2
S1_RRP5
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
UYU32389
UniProt:
A0ABY6JF95
LinkDB
All DBs
Position
479018..481153
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AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRFPGGFFRREGRPGEGETLIARLIDRPVRPLFPEGFVNEVQIIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQAELKESKLDLVVA
GTEGAVLMVESEAELLSEDQMLGAVVFGHDQQQVVIQNINDLVKEAGKPRWDWQPEAVND
ALNARVAALAESRLSDAYRITDKQERYSQVDLIKSETIAALLAEDESLDDNELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQNIDELMGERTDRFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPSADA
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITKEIMQAALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DNDKAKHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAEAPAAPAAPEAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtatggtcaacatactgtaacgcttgagacc
ggcatgatggcccgtcaggccactgctgccgtcatggtgagcatggatgacactgcggtt
ttcgtgaccgttgttggtcagaaaaaagcgaaaccaggccaggacttcttcccgctgact
gttaactaccaggagcgtacttacgctgctggtcgcttcccgggtggcttcttccgtcgt
gaaggccgtccaggcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgc
ccactgttcccggaaggcttcgttaacgaagttcagatcatcgccaccgtggtttccgtt
aacccgcaggttaacccggatatcgtcgcgatgatcggcgcttctgctgcgctgtctctg
tctggtattccgttcaacggcccaatcggtgccgctcgcgtgggttacatcaacgaccag
tacgtgctgaacccgactcaggctgagctgaaagagagcaagctggatctggtggttgct
ggtactgaaggtgccgtgctgatggttgaatccgaagctgaactgctgagcgaagaccag
atgctgggcgcagtggtgtttggtcatgaccaacagcaggttgtgattcagaacatcaac
gacctggtgaaggaagcgggtaaaccgcgctgggactggcagccagaagccgtgaacgac
gcgctgaacgcgcgcgttgctgcgctggcagaatcccgtctgagcgatgcgtaccgcatc
accgacaaacaggaacgttacagccaggttgatctcatcaaatctgaaaccatcgctgcc
ctgctggcagaagatgagtctctggatgacaacgagctgggcgagatcctgcacgccatc
gagaaaaacgttgttcgtagccgcgtactggcaggcgagccgcgtatcgacggtcgtgaa
aaagatatgattcgtggtctggacgtgcgcactggcgtactgccgcgtactcacggctcc
gcgctgttcacccgtggtgaaacgcaggcgctggttaccgctaccctgggtaccgagcgt
gacgcgcagaacattgatgagctgatgggcgagcgtactgaccgcttcctgttccactac
aacttccctccgtactccgtaggcgaaaccggcatggtcggttcaccgaagcgtcgtgag
attggtcacggtcgtctggctaagcgtggcgtgttggctgttatgccatctgccgatgct
ttcccgtacaccgtgcgcgtagtgtctgaaatcactgaatctaacggttcttcctccatg
gcttccgtgtgcggtgcttctctggcactgatggacgcgggcgtaccggtgaaagctgcc
gttgcgggtatcgcgatgggtctggtgaaagagggcgacaactacgttgtactgtccgac
atcctcggcgacgaagatcaccttggcgatatggacttcaaagttgcgggctcccgcgaa
ggtatcactgcgctgcagatggatatcaaaattgaaggcatcaccaaagagatcatgcag
gctgccctgaatcaggctaaaggtgcgcgtctgcacatcctgggcgtgatggagcaggct
atcaacgcgccgcgcggtgatatctctgaattcgcaccgcgtattcacaccatcaagatc
aacccggacaagatcaaagacgtcatcggtaaaggcggttctgttatccgtgccctgacc
gaagagaccggcaccaccatcgaaatcgaagatgatggcaccgtgaagatcgcagcaacc
gataacgataaagcaaaacacgctatccgtcgtatcgaagagatcaccgctgagatcgaa
gtgggtcgcatctacaatggtaaagtgacccgtatcgttgactttggcgcatttgttgcc
atcggtggcggtaaagaaggtctggttcacatctctcagatcgctgataagcgcgttgag
aaagtgactgattacctgcagatgggtcaggaagtaccggttaaggttctggaagttgac
cgtcagggccgcgtacgtctgagcatcaaagaagcaaccgagcagtctcagcctgctgaa
gcaccggccgcgccggctgcaccagaagccgagtaa
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