Siccibacter colletis: KFZ77_03750
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Entry
KFZ77_03750 CDS
T08544
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
scol
Siccibacter colletis
Brite
KEGG Orthology (KO) [BR:
scol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scol03016
]
KFZ77_03750 (thpR)
Enzymes [BR:
scol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KFZ77_03750 (thpR)
Transfer RNA biogenesis [BR:
scol03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KFZ77_03750 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UYU32648
LinkDB
All DBs
Position
complement(764318..764854)
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AA seq
178 aa
AA seq
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MSHLNRLFFALELPKTLQQEIVRWRATHFSPEAGKPVAAANLHMTLAFLGEVSAEKQQAL
TDLAGRISQPGFTLRLDDAGQWPRSRVAFLGSRQPPRGLLQLAALLRAQAARSGCWQSPQ
PFHPHITLLRQTDSALRLPAPGFSWECRITEFVLYASRVEQGRTRYQPLQRFALKKEL
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaccttaaccgactcttttttgcgctggagctgccgaagacgctgcagcaggag
atcgttcgctggcgggcgacgcacttctcacccgaggcgggaaagcctgttgccgccgcg
aatctgcatatgacgctggcgttcctcggcgaggtgagcgcggagaaacagcaggcgctg
acggatctggccggacgcatcagccagccgggctttaccctgcgccttgacgatgccggg
cagtggccacgctcgcgggtggcgtttctgggttcacgccagccgccgcgcgggctgttg
cagcttgctgccctgctgcgcgcccaggcggcccgcagcggttgctggcaaagcccgcag
ccgtttcatccgcatatcaccctgctgcgccagaccgacagcgcgctgcgcctacccgcg
ccgggctttagctgggagtgccgcatcacagagtttgtgctgtacgcatcccgcgttgaa
cagggccgcacccgctatcagccgctacagcgtttcgcacttaaaaaggaattgtaa
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