Siccibacter colletis: KFZ77_03925
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Entry
KFZ77_03925 CDS
T08544
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scol
Siccibacter colletis
Pathway
scol03030
DNA replication
scol03430
Mismatch repair
scol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KFZ77_03925 (dnaE)
03430 Mismatch repair
KFZ77_03925 (dnaE)
03440 Homologous recombination
KFZ77_03925 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scol03032
]
KFZ77_03925 (dnaE)
03400 DNA repair and recombination proteins [BR:
scol03400
]
KFZ77_03925 (dnaE)
Enzymes [BR:
scol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KFZ77_03925 (dnaE)
DNA replication proteins [BR:
scol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KFZ77_03925 (dnaE)
DNA repair and recombination proteins [BR:
scol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KFZ77_03925 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
MutS_II
Motif
Other DBs
NCBI-ProteinID:
UYU32681
UniProt:
A0ABY6JFS5
LinkDB
All DBs
Position
806708..810190
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGGSHGL
GIKPIIGADFVMQSDVLGDELSQITVLAANNTGYQNLTLLISRAYQRGYGVNGPWIDSAW
LAELNEGLILLSGGRMGDVGKSLLRGNRAMVDSCVAFYQRWFADRFYLELIRTGRPDEEN
YLHAAVALAEETGLPVVATNDVRFIDAGDFDAHEIRVAIHDGFTLDDPKRPRNYSTQQYM
RTEDEMCELFADLPEALENSVEIARRCNVTVRLGEYFLPQFPTGDMSTEDFLVMKSKEGL
EERLEFLFPDPDERAQKRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDESGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRREKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKNNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAILEARNEGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYANCQPWPEQTVLDGERETLGLY
LTGHPINQYLKEIERYVGGMRLKEMHPTERGKVITAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQHLLEQDRILIVSGQVSFDDFSGGLKMTAREVMDIADAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgttttgtacacctgagggtgcacagcgactactccatgattgatggg
ctggcaaagacgggaccgctggtaaaaaaggcggccgcgcttggcatgcccgcgctggcg
atcaccgactttactaacctgtgcggtctggtgaagttctacggtggatcgcacggcctc
ggcataaaaccgatcatcggtgctgattttgtgatgcagagcgatgtgttgggcgatgag
ctcagccagatcaccgtgctggctgccaataacaccggctatcagaacctgacgctgctc
atctcccgggcctatcagcgtggctacggcgtaaacggtccgtggatcgacagcgcctgg
ctggcggagctgaatgaaggcctgatcctgctctccggcgggcgcatgggcgacgtcggc
aaatcgctgctgcgcggtaaccgcgctatggttgacagctgcgtggcgttctatcagcgc
tggtttgccgatcgtttctacctggagctgatccgcaccggtcgtccggatgaggaaaat
tatctgcacgccgcggtcgcgctggctgaagagaccggtttgccggtggtcgccaccaat
gacgtgcgcttcattgacgccggcgactttgatgcgcatgagatccgcgtcgccattcac
gacggcttcaccctcgacgatccgaagcgtccgcgtaactactcgacccagcagtacatg
cgcaccgaagatgaaatgtgcgagctgtttgccgatctccccgaagcgctggaaaacagc
gtggaaatcgcccgtcgttgtaacgtcacggtacgcctcggcgaatacttcctgccgcag
ttcccgaccggggatatgtcgaccgaagatttcctcgtcatgaaatcgaaagaggggctg
gaagagcgcctggagtttctcttcccggacccggacgagcgcgcgcagaagcgccccgaa
tacgacgagcgtctggatatcgagttgcaggttatcaaccagatgggcttcccgggttac
ttcctgatcgttatggagtttatccagtggtcgaaggataacggcattccggtcgggccg
ggtcgtggttccggtgccggttcgctggtggcgtatgccctgaaaatcaccgatctcgat
ccgctggaatttgacctgctgtttgaacgcttcctgaacccggaacgcgtctcgatgcct
gacttcgacgtcgacttctgcatggagaaacgcgaccaggtgatcgaccacgtcgccgat
atgtatgggcgcgacgcggtatcgcagatcatcacctttggtaccatggcggcgaaagcg
gtgatccgcgacgtaggacgcgtgctcggccacccttacggcttcgtcgatcgtatctct
aagctggtgccgcccgatccgggcatgacgcttgccaaagcgttcgaagctgaaccgcag
ctgccggaaatttatgaagccgatgaggaagtgaaagccctcatcgacatggcgcgtaaa
ctcgaaggggtgacgcgtaacgccggtaagcacgccggtggggtagttatcgccccgact
aaaattaccgatttcgcgccgctttactgcgatgaatcaggtaatcatccggtcacccag
tttgataagaacgacgtggagtatgcaggcctggtgaagtttgacttcctcggtctgcgc
acgctcaccattatcgactgggcgctgaagatgattaacccgcgccgcgaaaagcagggg
ctggagccgatcgatatcgccgcaatcccgcttgacgacaagaaaagcttcgacatgctg
cagcgctcggaaaccactgcggtgttccagcttgaatcgcgcggcatgaaggatctgatc
aagcgtctgcagcctgactgcttcgaagatatgatcgcgctggtagcgctgttccgcccg
ggcccgttgcagtccggaatggtagataactttatcgaccgtaaacacggacgcgaagcc
atttcatacccggacatccagtggcagcatgaaagcctgaagccggttctggagccgacc
tacggcatcatcctgtatcaggaacaggtgatgcagatagcccaggtgctctcgggttat
accctcggcggggcggatatgctgcgccgcgcgatggggaaaaagaaacccgaagagatg
gccaagcagcgttctatcttcgaagacggtgcgaaaaataacggcgtcgacggcgagctg
gcgatgaaaatctttgacctggtagagaaatttgccggttacggatttaacaaatcgcac
tctgcggcttatgctttggtgtcgtaccagacgctgtggctgaaagcgcactatcctgcc
gagtttatggccgcggtaatgacagcggatatggacaacaccgacaaagtggtcgggctg
gtggatgagtgctggcgtatgggacttaagatcctgccgccggatatcaactccgggctg
tatcacttccacgtcaatgatgatggcgagattgtttacggcatcggcgcgattaaaggc
gtgggcgaaggcccgatcgaagcgatccttgaagcgcgtaacgaaggcggctatttccgc
gagctgttcgatctctgcgcccgcaccgacaccaaaaagctcaaccgtcgggtgctggaa
aaactgattatgtccggggcgtttgaccgcctcgggccgcaccgcgccgcgctgatgaat
tccctgggcgatgccctgaaggccgcggatcaacatgcgaaggcggaagccatcggccag
gcggatatgtttggcgtgctggcagaagagccggaacagattgagcagtcgtatgccaac
tgccagccctggccggagcagaccgtgctggatggtgagcgggaaaccctcgggctgtat
ctgacgggtcaccccatcaaccagtacctgaaagaaattgagcgttatgtcggcggcatg
cgccttaaagaaatgcacccgaccgagcgcggtaaagtcattaccgccgccggtctggtc
attgccgcgcgggtcatggtcaccaagcgcggtaaccgaatcggcatctgcacccttgat
gaccgttcagggcgtctggaagtgatgttattcacggacgcgctggaaaaataccagcat
ctgctggaacaagaccgaatcctgatcgtcagcggacaggtcagctttgatgacttcagc
ggcgggcttaaaatgaccgcccgcgaagtgatggacattgctgatgcccgtgaaaagtat
gcgcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttgaaccgt
ctccgtcagtctctggaaccccaccgttcggggacaattccagtacatctctactatcag
agggcggatgcacgtgcgcggttgcgtttcggcgcaacctggcgtgtttccccgagcgat
cgtctcttgaacgatctgcgtggcttgatcggttcggagcaggtggaactggagtttgac
tga
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