Siccibacter colletis: KFZ77_04265
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Entry
KFZ77_04265 CDS
T08544
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
scol
Siccibacter colletis
Pathway
scol00860
Porphyrin metabolism
scol01100
Metabolic pathways
scol01110
Biosynthesis of secondary metabolites
scol01120
Microbial metabolism in diverse environments
scol01240
Biosynthesis of cofactors
Module
scol_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
scol_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
scol00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
KFZ77_04265 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scol04147
]
KFZ77_04265 (hemB)
Enzymes [BR:
scol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
KFZ77_04265 (hemB)
Exosome [BR:
scol04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
KFZ77_04265 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
UYU32738
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All DBs
Position
complement(879375..880349)
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AA seq
324 aa
AA seq
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MTDLITRPRRLRRSPALRAMFEETTLTLNDLVLPIFVEEEIDDYKPINAMPGVMRIPEKH
LAREIERIANAGIRSVMTFGISHHTDDTGSDAWNPNGLVARMSRICKETVPEMVVMSDTC
FCEYTSHGHCGVLCDHGVDNDATLANLGKQAVVAAQAGADFIAPSAAMDGQVQAIRSALD
AAGFTDTAIMSYSTKFASSFYGPFREAAGTALKGDRKTYQMNPMNRREAIRESLLDAAQG
ADCLMVKPAGAYLDILRDIRERTELPLGAYQVSGEYAMIKFAAQAGAIDEHNVTLESLGA
IKRAGADLIFTYFALDLAEKKILS
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttgattacccgcccacgccgtctgcgccgctcgcccgcgctgcgtgcgatg
ttcgaagagacaaccctgaccttaaacgatctggtgttgcccatctttgttgaagaagag
atcgacgattacaagcccatcaacgccatgccgggcgtgatgcgtattcccgagaagcac
ctggcgcgtgagatcgagcgtatcgccaacgccggtatccgctcggtgatgaccttcggt
atctcgcaccacaccgacgacaccggcagcgatgcctggaacccgaacggcctggtggca
cgcatgtcccgcatctgcaaagagacggtgccggagatggtggtgatgtccgacacctgc
ttctgcgaatacacctcccacggccactgcggcgtgctgtgcgaccacggcgtcgataac
gatgcgaccctggctaacctcggcaagcaggcggtggttgccgcgcaggccggtgctgat
tttattgctccgtcagcggcaatggatggtcaggtgcaggcgatccgtagcgcgctggac
gcggcgggcttcaccgataccgctatcatgtcatactccaccaagttcgcgtcgtctttc
tacggcccgttccgtgaagcagcgggcaccgcgctgaaaggcgatcgcaaaacataccag
atgaacccgatgaaccgccgggaagcgatccgtgaatcgctgctcgacgcggcgcagggt
gcggactgcctgatggtaaaaccggccggtgcctatctcgatatcctgcgcgatattcgc
gagcgcaccgagctgccgctgggcgcgtatcaggtgagcggcgagtacgcgatgatcaaa
ttcgccgcccaggcgggtgctatcgatgagcacaacgtgacgctggaaagcctcggcgcc
atcaagcgtgccggtgcggatctgatcttcacctacttcgccctcgatctggcggagaaa
aaaatcctgtcataa
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