Siccibacter colletis: KFZ77_04395
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Entry
KFZ77_04395 CDS
T08544
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
scol
Siccibacter colletis
Brite
KEGG Orthology (KO) [BR:
scol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scol03400
]
KFZ77_04395 (sbcD)
DNA repair and recombination proteins [BR:
scol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KFZ77_04395 (sbcD)
Archaeal homologous recombinant proteins
KFZ77_04395 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
PRORP
Motif
Other DBs
NCBI-ProteinID:
UYU32763
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Position
complement(902167..903381)
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AA seq
404 aa
AA seq
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MRLIHTSDWHLGQNFYTKSRAAEHQAFLDWLVATAAEQQVDAIIVAGDIFDTGTPPSYAR
ELYNRFVVNLQATGCQLIVLGGNHDSVATLNESRELLACLNTWVFASAGLVAENQARVLQ
CRDGTPGAILCPVPFLRPRDIVKSQAGLSGSEKQTQLLHAITDHYQQCYDAACALRGDRD
LPIIVTGHLTTVGASKSDAVRDIYIGTLEAFPAERFPAADYIALGHIHRPQKVVSTGHIR
YCGSPIALSFDETGSEKSVLLVEFSHGKLQDITPLPVPVTQPLAVLKGDLTAIESQLERW
RDAPASPKVWLDIEVSGEAFMYDMQRQVLAMTEDLPVEVVLLRRSREQREQMAAGEHYET
LSELQVEEVFDRRLALEALSEEEKPPLRTLLARTLEEMQQEDDA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgattcacacctctgactggcaccttgggcagaatttttataccaaaagccgc
gccgccgagcatcaggcgtttctcgactggctggtcgcgaccgcggcagagcagcaggtg
gacgccatcatcgtggcgggggatatctttgataccggcacgccgccgagttacgcccgc
gagctgtacaaccggtttgtggtgaatctgcaggccaccggctgccagctcatcgtgctg
ggcgggaaccacgactcggtcgccacgctgaatgaatcccgcgagctgctggcctgcctc
aacacctgggtgttcgccagcgccgggctggtggccgagaaccaggcccgggtactgcag
tgccgcgacggcacgcccggggcgatcctctgcccggtgccgtttctgcgcccgcgcgac
atcgtaaaaagccaggcgggtctgtccggcagcgaaaaacagacccaactgctgcacgcc
attaccgatcactaccagcagtgctatgacgcggcctgcgccctgcgcggggatcgcgac
ctgccgatcatcgtcaccgggcaccttactaccgtcggggccagcaaaagcgatgcggtg
cgcgacatctatatcggcaccctggaggcgttcccggcggagcgcttccccgccgcggat
tacatcgcgctggggcatattcaccgcccgcagaaggtggtttccaccgggcacatccgc
tactgcgggtcgcccatcgccctgagcttcgatgaaaccggcagcgagaaaagcgtgctg
ctggtggagttcagccacggcaaactccaggacattacaccgctgccggtgccggtcacc
cagccgctggcggtgctgaaaggcgatttaaccgcgattgaaagccagctggaacgctgg
cgcgatgcccccgccagccccaaagtgtggctggatattgaagtcagcggcgaggccttt
atgtatgacatgcagcgccaggtgctggcgatgacggaagatctgccggtagaggtagtg
ctgctgcgccgcagccgcgaacagcgcgagcagatggctgccggagagcactacgaaacc
ctgagcgagctacaggttgaagaggtgtttgaccgtcggctggcgctggaagcgctgagc
gaggaagaaaaaccgccgctgcgcaccctgttagcccgaacgctggaagagatgcagcag
gaggatgacgcatga
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