Siccibacter colletis: KFZ77_05630
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Entry
KFZ77_05630 CDS
T08544
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
scol
Siccibacter colletis
Brite
KEGG Orthology (KO) [BR:
scol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scol03400
]
KFZ77_05630 (phrB)
Enzymes [BR:
scol01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KFZ77_05630 (phrB)
DNA repair and recombination proteins [BR:
scol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KFZ77_05630 (phrB)
Prokaryotic type
KFZ77_05630 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UYU32998
LinkDB
All DBs
Position
1171077..1172495
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AA seq
472 aa
AA seq
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MTTHLVWFRADLRLHDNLALAAACRNSNARVIGLFIATPEQWHAHTLAPRQAWFIREHLH
ALRDALAQRGIPLYTAQLDDFDACIPWISEFCDTHRVDALFYNYQYELNERKRDVALEKH
LDGFVTCQGFDDSVLLAPGSVLTGGREMYKVFTPFSRAYLKKLAEGLPECVHAPKARPSA
PCEAPPLAAFDYPVEAADEMLFPVGETAALAKLRQFCQQGAGEYDTRRDFPAIEGTSRVS
PYLAIGVLSPRQCLHRLLAEQPKALEGGPGAVWLNELIWREFYKHLMTYHPALCRGKPFI
SWTENVAWDNDDKRFDAWCAGRTGYPIVDAAMLQMNRTGWMHNRLRMIVASFLVKDLLID
WRQGERYFIAQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGQKFDAQGAFIRRW
LPALGKVPDKSLHDPWSWADKHGVTLDYPRPIVDHKQARVATLAAYEAARKS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatctggtctggttcagggctgacctgcgcctgcacgataatcttgccctc
gcggcggcctgccgcaacagcaacgccagggtcattggcctctttatcgccacccccgaa
cagtggcacgcccataccctggctccgcgccaggcctggtttatccgcgaacatctccac
gccttgcgtgacgccctggcgcagcgcggcatcccgctctataccgcgcagctggatgat
ttcgacgcctgcattccctggattagcgaattctgcgatacgcaccgcgtcgatgcgctg
ttctacaactatcagtacgaactcaacgagcgtaagcgcgacgtggcactggagaagcac
ctcgacggtttcgtcacctgccagggctttgacgacagcgtactgcttgcccccggtagc
gtgctgaccggtggccgcgagatgtacaaagtgtttacccccttcagccgggcgtacctg
aaaaagctggcggaaggattgccggagtgcgttcacgcgccgaaagcgcgcccgtcggca
ccctgtgaagcaccgccgctggcggcctttgactatccggttgaagcggcagacgaaatg
ctgttcccggtgggcgaaaccgccgcgctggcaaagctgcgccagttctgccagcagggt
gcgggtgaatatgatacccggcgcgacttccctgccattgaaggtaccagccgggtgtcg
ccctatctcgccatcggcgtgctgtcgccgcgccagtgcctgcatcgtctgctggcggaa
cagccaaaggcgctggagggcgggccgggcgcggtgtggctcaatgagcttatctggcgc
gagttttataagcatctgatgacttatcatccggcgctgtgccgcgggaaacccttcatc
agctggactgaaaacgtcgcctgggacaacgacgacaaacgcttcgacgcctggtgcgcc
gggcggaccggttatccgatcgtcgatgccgcgatgctgcagatgaaccgcaccggctgg
atgcataaccggctacgcatgatcgttgccagcttcctggtaaaggatctgcttatcgac
tggcgtcagggagagcgttattttatagcgcagctgatcgacggcgatctggccgccaat
aacggcggctggcagtgggcggcctccaccggcaccgatgcggcaccctatttccgcatt
ttcaaccccaccacccaggggcagaagtttgatgcgcagggggcgtttattcgccgctgg
ctgccggcgctgggcaaggtgccggataagtcgctgcacgacccctggagctgggcggat
aaacacggcgtgacgctggactatccgcgtccgatagtcgaccacaagcaggcgcgcgtg
gcgacgcttgcggcctatgaagccgcacgtaaatcttga
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