Siccibacter colletis: KFZ77_06240
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Entry
KFZ77_06240 CDS
T08544
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
scol
Siccibacter colletis
Brite
KEGG Orthology (KO) [BR:
scol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scol03009
]
KFZ77_06240 (rimO)
Enzymes [BR:
scol01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KFZ77_06240 (rimO)
Ribosome biogenesis [BR:
scol03009
]
Prokaryotic type
ribosomal protein modification factors
KFZ77_06240 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
UYU33111
UniProt:
A0ABY6JKL1
LinkDB
All DBs
Position
complement(1297651..1298964)
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AA seq
437 aa
AA seq
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MQQPRIGFVSLGCPKNLVDSERILTELRTEGYDVVPRYDDADMVIVNTCGFIDSAVQESL
EAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLKHVHHYVPKPQHNP
FLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGDVLAEAKRLVEA
GVKELLVISQDTSAYGVDVKHRTGFWNGAPVKTSMVSLCEQLAKLGVWVRLHYVYPYPHV
DDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREVCPELTLRSTF
IVGFPGETEDDFQMLLDFLKEARLDRVGCFKYSPVEGAGANDLPDQVPEAIKEERWNRFM
QLQQQISAERLQEKVGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKPGDVV
RVKVENADEYDLWGTRV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaccgcgaattgggtttgtctccctcggctgcccgaaaaacctcgtcgactcc
gagcgcatcctgacggaactgcgcaccgaaggctatgacgtggtgccccgctacgacgat
gccgacatggtgatcgttaacacctgcggctttatcgacagcgcggtgcaggagtcgctg
gaagccatcggcgaagcgttgaatgaaaacggcaaggtgattgtgaccggctgcctgggt
gctaaagaagatcaaattcgcgaagtgcatcctaaagtgctggagatcaccgggccacac
agctacgagcaggtgctcaagcacgtgcatcactacgtgccgaagccgcagcacaacccg
ttcctgagcctggtgccggaacagggcgtgaaactgacgccgcgtcattacgcctacctg
aaaatctctgaaggctgcaaccaccgctgcaccttctgcatcatcccgtcgatgcgcggc
gatctcgacagccgtccgattggcgacgtactggccgaagccaaacgtctggtcgaagct
ggcgtaaaagagctgctggtgatctcccaggatacctccgcctacggcgtggacgtgaag
caccgcaccggcttctggaacggcgcgccggtgaaaaccagcatggtcagcctgtgtgag
cagctggcgaagctcggcgtctgggtgcgtctgcactacgtttacccttacccgcacgtg
gatgacgtgatcccgctgatggcggaaggcaaaatcctgccctacctcgacatcccgctg
cagcacgccagcccgcgtatcctgaagctgatgaagcgtcctggctccgttgaccgccag
ctggcgcgcatcaagcagtggcgcgaggtgtgcccggaactgaccctgcgctccaccttt
atcgtcggcttccccggtgaaaccgaggacgatttccagatgctgctcgacttcctgaag
gaagcgcgtctggatcgcgtgggctgcttcaagtacagcccggtggaaggcgcaggtgct
aacgatctgccggaccaggtgccggaagcgatcaaagaggagcgctggaaccgctttatg
cagctgcagcagcagatctctgctgagcgcctgcaggagaaagtgggccgcgagatcctc
gtcatcatcgatgaagtggacgaagaaggtgccattggccgcagcatggccgatgcgccg
gaaatcgacggcgcggtctatctcaacggtgaaactaacgttaaacccggcgacgtggtg
cgcgtgaaggttgagaacgccgacgagtacgatctgtggggcacgcgcgtataa
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