Siccibacter colletis: KFZ77_09995
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Entry
KFZ77_09995 CDS
T08544
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
scol
Siccibacter colletis
Brite
KEGG Orthology (KO) [BR:
scol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scol03009
]
KFZ77_09995 (dbpA)
Enzymes [BR:
scol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KFZ77_09995 (dbpA)
Ribosome biogenesis [BR:
scol03009
]
Prokaryotic type
rRNA helicases
KFZ77_09995 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
AAA_22
Helicase_C_2
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
UYU30236
LinkDB
All DBs
Position
complement(2097693..2099066)
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AA seq
457 aa
AA seq
DB search
MTSFSDLNALPEAQLANLNELGYLAMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG
LLQHIDASQFITQSLVLCPTRELADQVAKELRRLARFMSNIKILTLSGGQPFGVQRDSLQ
HAPHIIVATPGRLLDHLEKATVQLNALQTLVLDEADRMLDMGFAEAIDDVIRHAPASRQT
LLFSATWPAGIAAISKRVQRDPQSIEIDTVDELPAVEQHFYEVSRGAKTGLLQALLSKHQ
PASCVVFCNTKKDCQAVCDALNARGQSALALHGDMEQRDRDQTLVRFANGSSRVLVATDV
AARGLDIKSLEMVINYELSWDPEVHVHRIGRTARAGESGLAISFCAPEEAQRAAVLAEML
NLSLNWQSAPTGGAVKPLEAAMATLCIDGGKKARMRPGDILGALTGDMGLDGADIGKIDM
HPIHSYVAVRESVARHAWKQLQQGKIKGKSVKVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgacatctttttccgacttaaacgccttacctgaagcccagctcgccaacctcaacgag
ctgggttacctcgccatgaccccggttcaggccgcagcgctgcccgctattcttgccgga
aaagatgttcgcgtgcaggcgaaaaccggcagcggcaaaaccgccgcctttggccttggg
ctgctgcagcacattgatgccagccagtttatcacccagtcgctggtgctctgtccaacc
cgcgaactggcggatcaggtggcgaaagagctgcgccgtctggcgcgctttatgtctaac
atcaaaatcctcaccctgtccggcggtcagccgttcggcgtgcagcgcgattcgctgcaa
cacgccccgcacatcatcgtcgccacgccagggcgtctgcttgatcatctcgaaaaagcc
accgtgcagctcaatgccctgcaaacgctggtgctggacgaagccgaccgcatgctcgac
atgggcttcgctgaggcgatcgatgacgtgatccgccatgcgccggcgtcgcgccagacg
ctgctgttctctgcgacctggcctgccggcattgccgccatcagtaaacgcgtgcagcgc
gatccgcagagtattgagatcgacaccgtggacgaactgccggcggtggagcagcacttc
tatgaagtgtcgcgcggtgcgaaaaccgggctgctacaggctctgctcagcaagcaccag
cccgcgtcctgtgtggtgttctgcaataccaaaaaggattgtcaggcggtgtgcgatgcg
ctgaatgcccgtggtcagagcgcgctggcgctgcacggcgatatggagcagcgcgaccgc
gaccagacgctggtgcgttttgctaacggcagcagccgcgtactggtggccaccgacgtg
gccgcgcgcgggctggacatcaaatcgctggagatggtgatcaactacgagctctcctgg
gacccggaagtacacgtgcaccgcatcgggcgcaccgcccgcgccggcgagagcgggctg
gccatcagcttctgcgcgccggaagaggcgcagcgtgcggcggtgctggcagagatgctg
aacctgtcgcttaactggcagagcgcgccgacgggcggggcggtgaaaccgctggaagcc
gcgatggcgacgctgtgcattgacggcgggaaaaaggcgaggatgcgtccgggcgatatc
ctcggggcgctgaccggtgacatggggctggacggcgcagacatcggcaagatcgacatg
catccgatccactcctacgtggcagtgcgcgagtcggtggcacgtcacgcgtggaagcag
ttgcagcagggtaaaatcaaaggcaagtcggtgaaggtgcggttgctgaagtaa
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