Siccibacter colletis: KFZ77_12230
Help
Entry
KFZ77_12230 CDS
T08544
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
scol
Siccibacter colletis
Brite
KEGG Orthology (KO) [BR:
scol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scol03400
]
KFZ77_12230
DNA repair and recombination proteins [BR:
scol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
KFZ77_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
UYU30647
LinkDB
All DBs
Position
complement(2517959..2518429)
Genome browser
AA seq
156 aa
AA seq
DB search
MADVHDKATRSKNMRAIATRDTAIEKRLAGLLTTLGISFRVQDAALAGRPDFVVDDYQAV
IFTHGCFWHHHDCYLFKVPATRTDFWLDKIGKNVARDKRDIALLLEQGWRVLVVWECALR
GRAKLSDEALSERLEEWICSGGVRADIDIRGIHLSD
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgtacacgacaaagcgacgcgcagtaaaaacatgcgcgctatcgccacgcgc
gataccgcaattgaaaaacgccttgccgggctgcttaccacgctcggcatttccttccgg
gtgcaggatgccgccctggccggtcgcccggacttcgtggtagacgactaccaggcggtg
atcttcacccatggctgcttctggcatcatcacgactgctatctgtttaaggttcctgct
acccgcaccgatttctggctggataaaatcggcaaaaacgttgcccgcgataagcgggat
attgcgctgctgctggagcagggctggcgggtgctggtggtatgggagtgcgcgttacgc
gggcgggcgaagctcagtgatgaggcgctcagcgagcgccttgaagagtggatctgcagc
ggtggcgtgcgcgcggatatcgacattcgcggcattcacctcagcgactga
DBGET
integrated database retrieval system
