Siccibacter colletis: KFZ77_15940
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Entry
KFZ77_15940 CDS
T08544
Name
(GenBank) PD40 domain-containing protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
scol
Siccibacter colletis
Pathway
scol00040
Pentose and glucuronate interconversions
scol01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KFZ77_15940
Enzymes [BR:
scol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
KFZ77_15940
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Gene cluster
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Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
UYU31315
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All DBs
Position
3323196..3324371
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AA seq
391 aa
AA seq
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MAKGMKVKLNYEVSRDPDTGAEVTRLTPPEVTCHRNYFYQKCFTQDGSRLLFAGEFDGHW
NYYLLDLVDASAIQLTEGAGDNTFGGFLAPDDKSLYYVKNERSLLQVDLATLEEREIYRV
PDEWVGYGTWVANSDCTKLVGIEIAKSDWVPLNDWQIFQEFFHKGPHCRLLRVDLQTGES
AVIHDERIWLGHPIYRPFDDNTVAFCHEGPHDLVDARMWLVNEDGSNVRKVKDHAEGESC
THEFWVPNGSALVYVSYLKGKQGRTVYRFDPETAINEEIMPIPACSHLMSNFDGTLLVGD
GSGTPVDVKDTSGYRIENDPYLYVFDVKQKAYFRVARHDTSWATFANSRQVTHPHPSFTP
DDSAILYSSDKDGKPALYIAKLPEQREMITV
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggcatgaaggttaagcttaattatgaggtaagccgggacccggataccggc
gcagaagtcacccgcttaaccccaccggaagtaacctgtcaccgcaactacttctatcag
aagtgcttcacccaggatggcagccgcctgctgttcgccggcgagttcgatggtcactgg
aactactatctactcgatctggtcgatgccagcgcgatacagctcaccgagggcgcgggt
gataacacctttggcggcttcctcgccccggacgataagtcgctctactatgtgaaaaac
gagcgttccctgctgcaggtcgatctggccacgctcgaggaacgcgagatctaccgcgtt
cccgatgaatgggttggctacggcacctgggtagctaacagcgactgcaccaaactggtc
ggcatcgaaattgctaaaagcgactgggtgccgctcaacgactggcagattttccaggag
ttcttccacaaagggccgcactgtcgcctgctgcgcgtcgatctgcagacgggtgaaagt
gccgtgatccacgatgagcgcatctggcttggtcatcctatttatcgtccgtttgacgat
aataccgtggcgttctgtcacgaggggccgcacgatctggtggacgcccgtatgtggctg
gtgaatgaagatggcagcaacgtacgcaaggtaaaagatcacgccgagggcgaaagctgc
acgcacgaattctgggtgcccaacggatcggcgctggtgtacgtctcctacctgaaaggc
aaacaagggcgcacggtttaccgcttcgatcctgaaaccgctattaatgaagaaattatg
ccgataccggcctgttcgcacctgatgagcaacttcgacggcacgctgctggttggcgac
ggttccggcaccccggttgacgtaaaagacaccagcggttaccgcattgaaaacgatcct
tacctctacgtgttcgatgtaaaacaaaaagcgtatttccgcgtggcacgtcacgacacc
tcctgggccaccttcgccaacagccgccaggtcacccatccgcacccgtcgttcacgccg
gatgattccgccatcctgtacagctctgataaagacggtaagccggcactgtatattgcg
aaattaccggaacagcgggagatgattaccgtttaa
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