Siccibacter colletis: KFZ77_16920
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Entry
KFZ77_16920 CDS
T08544
Symbol
treR
Name
(GenBank) trehalose operon repressor TreR
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
scol
Siccibacter colletis
Brite
KEGG Orthology (KO) [BR:
scol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scol03000
]
KFZ77_16920 (treR)
Transcription factors [BR:
scol03000
]
Prokaryotic type
Helix-turn-helix
LacI family
KFZ77_16920 (treR)
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Ortholog
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GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_31
HTH_IclR
HTH_3
HTH_7
MarR_2
AAA_18
HTH_Tnp_ISL3
HTH_Crp_2
TrmB
HTH_26
PF0610-like_N
CENP-B_N
MarR
SpoIIID
HTH_24
HHH
HTH_38
Motif
Other DBs
NCBI-ProteinID:
UYU31490
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Position
3535104..3536051
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AA seq
315 aa
AA seq
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MNKRLTIKDIARLSGVGKSTVSRVLNNESGVNERTRERVEAVMQEQGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPVFYAEGYDPIMMESQFSPALIAEHLRMLRSRNID
GVVIFGFSGVTPEMLQPWQPSLVLVARDASGFASVCYDDEGAMQLLLQRLYDMGHRHISF
LGVPDSDITTGLRRHQAYLDFCARHQLTPHVVQPGLTMVNSYENFTRTLTPDTTAVVCGT
DTMALGAGKYLHQHPELRIQLASIGYTPLIAFLHPDLVGVSLGYAEAGRKAAVQLMGQIT
RQAELKQIVIPATLN
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaggcttactatcaaagacatagcacgactaagcggggtcggaaagtccacc
gtctcccgggtgcttaataacgaaagtggcgtcaatgaacgtacccgggagcgggttgaa
gcggtaatgcaggagcagggattctcgccgtcacgctcggcacgtgccatgcgcggccag
agcgataaggtggtggcgataatcgtcacgcgcctcgattcgctgtcggagaacctggcg
gtgcaaaccatgctgccggtcttttatgccgaaggctatgacccgatcatgatggagagc
cagttctctccggcactgatcgccgagcatctcaggatgttgcgcagccgcaatatcgac
ggggtggtgatttttggtttcagcggggtaacgccggagatgctgcagccgtggcagcca
tcgctggtgctggtggcgcgtgatgcgtcgggatttgcgtcggtctgctatgacgacgag
ggtgctatgcagctgctgcttcagcgcctgtatgatatggggcaccgccatatcagcttc
ctcggcgtcccggacagcgacatcactaccgggctgcgtcgccatcaggcgtatctggac
ttctgcgcacgccatcagctcacgccgcacgtggtgcagccgggtctgacgatggtgaac
agctatgaaaattttacccgtacgttgacgccggataccaccgcggtggtgtgtggcacc
gataccatggcgctcggtgccggtaaatatttgcatcagcatccggagctccgtattcag
ctggccagcatcggctataccccgctgattgcgtttttgcatccggatctggttggcgta
tcgctggggtacgcggaagccgggcgtaaagccgccgttcagcttatgggccagattacg
cgtcaggctgagctgaaacagatagtgatccccgccacgttaaattaa
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