Siccibacter colletis: KFZ77_17355
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Entry
KFZ77_17355 CDS
T08544
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
scol
Siccibacter colletis
Pathway
scol03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
scol00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KFZ77_17355 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scol03019
]
KFZ77_17355 (orn)
03009 Ribosome biogenesis [BR:
scol03009
]
KFZ77_17355 (orn)
Messenger RNA biogenesis [BR:
scol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KFZ77_17355 (orn)
Ribosome biogenesis [BR:
scol03009
]
Eukaryotic type
Pre-60S particles
RNases
KFZ77_17355 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UYU31570
UniProt:
A0ABY6JCK5
LinkDB
All DBs
Position
complement(3625919..3626464)
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AA seq
181 aa
AA seq
DB search
MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDKDLNILAEGPVMAVHQSDAQLALMDD
WNVRTHTASGLVDRVKASAFDDSAAEQATLAFLREWVPAGTSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEVLDGFKKQGTHQALDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaatgaaaacaacctcatttggatcgatcttgaaatgaccggcctcgatcct
gagcgtgaccgcatcatcgaaatcgccacccttgtcaccgataaagatcttaacattctg
gcagaaggcccggtgatggcggtgcaccagtccgacgcccagctggcgctgatggacgac
tggaacgtgcgcacccacacggcaagcggcctggtggatcgcgtgaaagccagcgccttt
gatgacagcgccgccgagcaggcgaccctggcgtttctgcgtgaatgggtgccggcgggg
acgtcacccatctgcggcaacagtatcggccaggatcgtcgttttctcttcaaatatatg
ccggaactggaagcctacttccattatcgctatctggacgtcagcaccctcaaagagctg
gcgcgtcgctggaagccggaagtgctggacggttttaaaaagcagggtacgcaccaggcg
ctggacgacatccgcgagtcggtggcggagctggcgtattatcgcgagcatttcatcaag
ctgtaa
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