Siccibacter colletis: KFZ77_17825
Help
Entry
KFZ77_17825 CDS
T08544
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
scol
Siccibacter colletis
Brite
KEGG Orthology (KO) [BR:
scol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scol03000
]
KFZ77_17825 (rtcR)
Transcription factors [BR:
scol03000
]
Prokaryotic type
Other transcription factors
Others
KFZ77_17825 (rtcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
AAA_22
NACHT
AAA_19
MCM
AAA_2
T2SSE
AAA_14
AAA_30
AAA_7
AAA_33
ATPase_2
AAA_25
ResIII
TsaE
NTPase_1
AAA_18
ABC_tran
AAA_29
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
UYU31660
LinkDB
All DBs
Position
3730242..3731849
Genome browser
AA seq
535 aa
AA seq
DB search
MKKRRVVIGMLGTVLDKRGKRANRWNKWRPTVGLCLHPDLPVDRFELLCQPRDAVLAQRV
VEDIALASPHTEVRPHTVTLNDPWDFEEVYAALLDFATRYPFDTEREEYLVHITTGTHVV
QICWFLLTEARYLPAGLVQTSPAHRDVTDAALTAAGTYSVIDLDLSRYTTLTSRFQREQQ
QSVSFLKAGIDTRNATFNRLIDQIERVALRSTAPILLTGPTGAGKSFLAQRIFQLRQSRH
QVQGRLVAVNCATLRGDNAMSTLFGHVKGAFTGALQARAGLLREADGGVLFLDEIAELGL
DEQAMLLKAIEEKTFLPFGADNEVCSDFQLIAGTHRDMPQWVAEGRFREDLYARINMWTF
ALPGLAQRREDIAPNVEYELQRFAGQQQTQVRFDKEAKAAYLTFACSPQAAWRGNFRELS
ASVARMATLAEQGRITLGLVEEETARLRQNWRSSNPVPASLPVKEEIDLFDQRQLETVIE
VCRRSASLSEAGRSLFAVSRQKKQNPNDADRLRKYLARFDLSWEQIHADDEGISS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcgtcgggtggtgattggcatgctgggtaccgtgctggacaagcgcggaaaa
cgcgccaaccgctggaacaagtggcgaccgacggtcgggctgtgcctgcatcccgatctg
cctgtggatcggtttgagctgctgtgccagccgcgtgacgccgtgctggcgcagcgggtg
gtggaagatatcgccctcgcctcgccgcataccgaggttcgcccgcataccgtgacgctc
aacgatccctgggatttcgaagaggtgtacgccgcgctgctcgactttgccacccgctac
ccgttcgataccgaacgcgaggagtatctggtccacatcactaccggtactcacgtcgtg
cagatctgctggttcctgctgaccgaagcccgctacctgcccgcgggcctggtgcagacc
agcccggcgcatcgtgatgtcaccgatgccgccttgaccgctgccggaacctactcggtt
atcgatctcgatctgagccgctacaccacgctcaccagccgcttccagcgcgaacagcag
cagtcggtctctttcctcaaggccggcatcgacacccgcaatgccacctttaaccgtctg
attgaccagatcgaacgcgtggccctgcgttcaaccgccccgatcctgctcaccgggccg
accggggccgggaaatcgttcctggcgcagcgcatcttccagctgcgacagtcgcgccat
caggtacagggccggctggtggcagtgaactgtgcgacgctgcgtggagataacgccatg
tcgaccctgttcggccatgtcaaaggtgcgtttaccggcgcgttgcaggcgcgggcgggt
ctgctgcgggaagcggacggcggcgtgttatttcttgatgagattgcagagctgggcctc
gacgaacaggcgatgctgctcaaggctattgaggagaaaaccttcctgccgttcggcgcg
gataacgaggtgtgcagcgacttccagctgatcgccggcacccaccgggatatgccgcag
tgggtagcggaagggcgttttcgtgaagatctctatgcccgcatcaacatgtggaccttt
gccctgccaggcctcgcgcagcgccgggaggacattgcgcccaacgtggaatatgagctg
cagcgctttgccgggcagcagcagacgcaggtacgcttcgataaagaggcgaaggcagcg
tatctgaccttcgcctgctcgcctcaggcagcctggcgcggcaactttcgcgagctgagc
gcctcggtcgcgcgtatggcaacgcttgccgagcaggggcgcattacgctgggtctggtg
gaggaggagacggcacgcctgcggcagaactggcgcagcagcaatcccgttccggcgtcg
ctgccggtgaaggaagagatcgatctttttgaccagcgccagctggaaacggtgattgag
gtgtgtcgccgcagcgcctcgctgtcggaagcgggtcgctccctgtttgcggtatcgcgt
cagaagaagcagaaccctaacgatgccgatcggctgcggaaataccttgcccgcttcgat
ctcagctgggagcagatccacgccgacgatgaaggcatttcatcataa
DBGET
integrated database retrieval system
