KEGG   Siccibacter colletis: KFZ77_18675
Entry
KFZ77_18675       CDS       T08544                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
scol  Siccibacter colletis
Pathway
scol03030  DNA replication
scol03410  Base excision repair
scol03420  Nucleotide excision repair
scol03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:scol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KFZ77_18675 (polA)
   03410 Base excision repair
    KFZ77_18675 (polA)
   03420 Nucleotide excision repair
    KFZ77_18675 (polA)
   03440 Homologous recombination
    KFZ77_18675 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scol03032]
    KFZ77_18675 (polA)
   03400 DNA repair and recombination proteins [BR:scol03400]
    KFZ77_18675 (polA)
Enzymes [BR:scol01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KFZ77_18675 (polA)
DNA replication proteins [BR:scol03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     KFZ77_18675 (polA)
DNA repair and recombination proteins [BR:scol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     KFZ77_18675 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KFZ77_18675 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH HHH_5
Other DBs
NCBI-ProteinID: UYU33911
LinkDB
Position
complement(3913679..3916465)
AA seq 928 aa
MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIVPLHEMVKAMGLPLLAVSGVEADDVIGT
LAREAEKAGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPEEVVAKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYGEPEKIATLSFRGAKTMATKLADNK
DVAYLSYQLATIKTDVELELSAEQLEVQQPAAGALMEMFRRYEFKRWTADVEAGKWLQAK
GAKPAAKPQETIVIDEEPDEPAVALSQENYVTILDEETLQAWIARLKKAPLFAFDTETDS
LDNHSANLVGVSFAIEPGDAAYLPVAHDYLDAPDQVSRERALELLKPLLEDENALKVGQN
LKYDRGVLQNYGIELRGIAFDTMLESYILNSVSGRHDMDSMAERLLKHKTITFEEIAGKG
KNQLTFNQIALEQAGPYAAEDADVTLQLHLKMWPKLQKEAGPRAVFEKIEMPLVPVLSRI
ERNGVKIDPAVLHKHSEEITLRLAELEQKAHEIAGEPFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILQYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNDEGRRIRQAFIAPQDYVIVSADYSQIELRIMAHLSRD
KGLLDAFSQGLDIHRATAAEVFGMSLEQVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIS
RKESQKYMDLYFERYPGVLEYMERTRKQAKEQGYVETLDGRRLYLPDINSSNAARRAGAE
RAAINAPMQGTAADIIKRAMIDVDKWLESEKPRVQLIMQVHDELVFEVHKDDVETVSRKI
HELMENTMKLDVPLLVEVGSGENWDRAH
NT seq 2787 nt   +upstreamnt  +downstreamnt
atggttcagatcccacaaaacccccttatcctcgttgatggttcctcttatctttaccgg
gcctaccacgcctttccgccgctgactaacagcgccggcgagccgacaggggcaatgtac
ggtgtgctgaacatgctgcgcagcctgatcatgcagtaccagccgactcatgcggcggtc
gtgtttgatgccaagggtaaaaccttccgcgacgagctgtttgaacactacaaatctcac
cgtcccccgatgccggacgacctgcgcgcgcagatcgtgccgctgcatgagatggtcaaa
gccatgggcctgccgctgctggcggtatccggcgtcgaggccgatgacgtcatcggtacg
ctggcgcgtgaagcggaaaaagcagggcgtccggtgctcatcagtaccggcgataaagat
atggcgcagctggttacgccaggtatcaccctcatcaataccatgactaataccattctc
ggcccggaagaggtggtagcgaaatatggcgtaccgcctgagctgatcatcgacttcctt
gccctgatgggtgactcctcagataacatccctggcgtgccgggcgtgggagagaaaacg
gcccaggcgctgctgcagggtcttggcggcctggataccctctacggcgaacccgagaag
atcgcgaccctcagcttccgcggtgccaaaacgatggcgaccaaactggccgacaataaa
gacgtggcgtatctctcgtatcagctcgcgaccatcaaaaccgatgttgaactggagctg
agcgccgagcagctggaagtgcagcagccggcggccggggcgctgatggaaatgttcagg
cgctacgagttcaaacgctggaccgctgacgtagaagcgggcaagtggctgcaggcaaaa
ggcgctaaacccgctgcgaagccgcaggaaactatcgttatcgatgaagagccagacgaa
ccggccgtggcgctctctcaggaaaattatgtcaccatcctggacgaagagacgctgcag
gcctggattgcgcgcctgaaaaaagcgccgctgttcgccttcgatacggaaaccgacagt
ctggataatcactcagctaatctggtgggcgtttcctttgctattgaaccgggtgatgcg
gcgtacctgccggtcgctcatgactacctggacgcgccggatcaggtttcccgcgagcgc
gcccttgagctgttgaagccgctgcttgaagatgaaaatgcacttaaggtcggccagaat
ctgaaatacgaccgcggcgtgttgcagaactacggtatcgaactgcgcggtatcgccttc
gacaccatgctggagtcgtacattcttaacagcgtctccgggcgccacgatatggactcg
atggcggagcgcctgctgaagcataaaaccatcacctttgaagagattgccggcaagggc
aaaaaccagctgacgttcaaccagattgctcttgagcaggccgggccttatgccgccgaa
gacgcggacgtcacgctgcagctacaccttaaaatgtggccgaagctgcaaaaagaggcg
ggtccacgcgcggtatttgaaaaaatcgaaatgccgctggtgccggtgctgtcgcgcatc
gagcgcaacggcgtcaaaatcgacccagcggtgttgcataagcactctgaagagatcacg
ctgcgtctggccgagcttgagcagaaggcgcatgagattgccggcgaaccgttcaacctc
tcctcgaccaagcagctgcaaaccattctgtttgaaaagcagggcatcaagccgctgaag
aaaacgccgggtggcgcgccgtccacttctgaagaggtgcttgaggagctggcgctggac
tatccgctgccgaaagtcatcctgcaatatcgcgggctggcgaagctgaaatcgacctat
accgataagcttccgctgatgattaacccgaaaaccggccgggtacacacctcttatcac
caggcggtcacggcgaccgggcgtctgtcgtccaccgatccgaacctgcagaacattccg
gtgcgtaacgacgaaggacgacgcattcgtcaggcgtttattgcgccgcaggattacgtc
atcgtttcagcggactactcgcaaattgagctgcgcattatggcgcatctgtcgcgcgat
aaaggcctgctggatgccttctcgcaggggctggatattcaccgcgccaccgcagcggaa
gtgtttggcatgtcgcttgaacaggtcactggcgaacagcgtcgcagcgccaaagccatt
aacttcggtctgatctacggcatgagcgcttttgggttgtcgcgccagttgaatatctcc
cgtaaagagtcgcagaagtatatggatctctactttgagcgctacccgggcgtgctggag
tacatggagcgcacccgtaaacaggcgaaagagcagggttatgttgaaacgctggacggg
cgtcgtctctacctgccggatattaactccagcaacgcggcgcgccgcgccggtgcggaa
cgtgcggcaatcaacgccccgatgcaggggacggcggcggatattatcaagcgcgctatg
atcgacgttgataagtggctggagagcgaaaagccgcgcgtgcagcttattatgcaagta
cacgatgaactggtgttcgaagtgcataaagacgacgtagaaacagtatccagaaagatt
catgaactgatggaaaacaccatgaagctggacgtgccgttgctggtggaagtaggcagc
ggtgaaaactgggatcgggcgcactaa

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