Snodgrassella communis: PYG29_00295
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Entry
PYG29_00295 CDS
T09364
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
scom
Snodgrassella communis
Pathway
scom03030
DNA replication
scom03430
Mismatch repair
scom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PYG29_00295
03430 Mismatch repair
PYG29_00295
03440 Homologous recombination
PYG29_00295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scom03032
]
PYG29_00295
03400 DNA repair and recombination proteins [BR:
scom03400
]
PYG29_00295
Enzymes [BR:
scom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PYG29_00295
DNA replication proteins [BR:
scom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PYG29_00295
DNA repair and recombination proteins [BR:
scom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PYG29_00295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WMY91861
LinkDB
All DBs
Position
69835..71256
Genome browser
AA seq
473 aa
AA seq
DB search
MSIVANNDAAAFAELAAVLFTLPLPVAIVDLETTGGHFEHDRITEIAILRFHHGHISRHQ
WLLNPQQPISDFITQLTGISNEMVQNAPAFADIAKELLPLLRGHLLVAHNSRFDYTFLRH
AFARCHINFAAPTLDTVPFSRKLYPQHFKHNLDSIIERFAINIAATERHRAMGDVLALTE
FLQCSLYEKTAAIWLAQWQALIKPGYLPAWLKPELRQHLYALPDSPGLILWQAARQEATT
MMVQERAFTDICTLLQDKNAQRQWPQTGTVDFIPANSILHALWLQGYYQLQQQAQPYADE
TVPPAKWYTVSFVANHHDQLQARIITLKEGILSQPPYGLFMHPRAAKRALADWARRYGLC
PAVLDITPQSLARNEPCPNQAAQLCDGSCRLDAATQKQNELVLQYAPLLPVCDWGRWHQL
QLTEVEAVTAAEVVLEAQAGCIRLDEQHWYFHPLLPKLLKQRLKRPANIVFVR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgttgctaataatgacgccgctgcatttgccgagctggcagcggttctgttt
acgctgcctttgcctgttgccattgttgatcttgaaaccactggcggtcactttgagcac
gaccggattactgaaattgctattctgcggtttcatcatgggcacatcagccgtcatcaa
tggctgcttaatccgcaacagccgattagtgattttattactcaattaactggtatcagc
aatgaaatggtgcaaaatgcacctgcttttgctgatattgctaaggagctgctgccttta
ttacgtggtcacctgctggttgctcataatagtcgctttgattatacatttctgcgccat
gcctttgcacgctgtcatattaactttgccgcaccaactctggatactgttcccttttca
cgtaagttatatcctcagcactttaaacataatctggatagcattattgagcgttttgcg
attaatattgcagctaccgaacgtcatcgtgcaatgggagatgtactggcactgacagag
tttctgcaatgcagtttatatgaaaagactgctgctatctggctggcacaatggcaggct
ctgattaaaccgggctatttacccgcatggctcaaacctgaattacgccagcatttatat
gctttaccagatagtccgggcttgattctgtggcaggcagcacggcaagaggcaaccaca
atgatggtacaggaacgggcatttactgatatctgtacgttattacaggataagaatgcg
caaaggcaatggccgcaaaccggtactgttgattttattccggctaacagcattttacat
gcgctatggctgcaaggctattatcagctgcaacaacaggcacaaccctatgctgatgaa
acagtcccgccagccaaatggtatacggtttcttttgtggcaaaccatcatgatcagcta
caggcacgaattattacgcttaaggaaggtattctgtcacaaccaccttatggattattc
atgcatccgcgtgctgccaaacgggcactggctgactgggcacgccgctatggtttatgt
ccggcagttctggatatcactcctcagagtcttgcccgcaatgagccctgtcccaatcag
gcagcgcagttatgtgacggcagttgtcgtctggatgcggctacgcagaaacagaatgag
ctggtattacaatatgcgccgttattgccggtttgtgactggggtagatggcatcagtta
cagcttactgaggtcgaagcagtaacggcagcagaagtagttttggaagcgcaggccggc
tgtatacgactagatgaacagcactggtatttccatcctctcttaccgaaactcctgaaa
cagcggctgaaaagaccagcaaatattgtatttgtacgctga
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