Snodgrassella communis: PYG29_02330
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Entry
PYG29_02330 CDS
T09364
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
scom
Snodgrassella communis
Pathway
scom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PYG29_02330 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scom03021
]
PYG29_02330 (rpoA)
03400 DNA repair and recombination proteins [BR:
scom03400
]
PYG29_02330 (rpoA)
Enzymes [BR:
scom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PYG29_02330 (rpoA)
Transcription machinery [BR:
scom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PYG29_02330 (rpoA)
DNA repair and recombination proteins [BR:
scom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PYG29_02330 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF7286
Motif
Other DBs
NCBI-ProteinID:
WMY92227
LinkDB
All DBs
Position
486846..487832
Genome browser
AA seq
328 aa
AA seq
DB search
MQNTSEFLKPRQIDVDTLSATRAKVSMEPFERGFGHTLGNALRRILLSSMNGYASTEVTI
EGVLHEYSTLDSVQEDVVDILLNLKGVVFKVHGRTEVTLSLKKSGAGVVTAADIELPHDV
EIVNPDYVICHLSEGGSINMEIKVEQGRGYESVSGRRNKDDHKRIGAIQLDASFSPISRV
SFEVEPARVEQRTDLDRLVLDIETNGAIDPEEAVRSAACILIDQMSIFADLQGTPVAVVE
EKEPPIDPILLRPVDDLELTVRSANCLKAEDIYYIGDLIQRTETELLKTPNLGRKSLNEI
KEVLASKGLTLGSKLEAWPPASLEKPQV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacacatccgaattcttgaagccacgtcaaattgacgttgacaccttgtctgca
acccgtgccaaagtgtctatggagccttttgaacgtggtttcggccatacgttgggtaat
gctttgcgtcgtatcttactgtcatcaatgaatggttatgcgtcgacagaagtaacgatt
gaaggcgtattgcatgaatactctacgcttgacagcgtacaggaggatgttgttgatatc
ctgctgaatctgaagggcgtagtattcaaggtgcatggccgcacagaggtaactttaagt
ctgaaaaaatcaggtgcaggtgttgtcactgctgctgatatagagttaccgcacgatgtc
gaaattgttaaccctgattatgttatttgccatctttctgaaggtggtagtattaatatg
gaaattaaggttgaacaaggtcgaggttatgaatctgtgtcaggacgtcgaaataaagac
gaccacaaacgtatcggcgctattcaactagatgcaagcttttcgcctatcagtcgtgtt
agctttgaagtggaacccgctcgtgtagagcagcgtactgatttagaccgcttggttctg
gatattgaaaccaatggtgctattgatccagaagaagcggttcgcagtgcggcctgtatt
ttaattgaccagatgtcaatttttgccgatttacagggtactccggttgcggtggtggaa
gaaaaagaaccaccaattgatccgattttgcttcgtccagttgatgatctggagttgact
gttcgttcagcaaactgcttgaaagctgaagatatttactatattggcgatttgattcaa
cgcacagagactgaattattgaaaaccccgaatttgggtagaaaatctctgaacgaaatc
aaggaagttttggcttccaaaggtttgacgttgggttcaaaactagaagcctggccaccg
gccagtctggaaaagcctcaagtttga
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