Snodgrassella communis: PYG29_03320
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Entry
PYG29_03320 CDS
T09364
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
scom
Snodgrassella communis
Pathway
scom00300
Lysine biosynthesis
scom01100
Metabolic pathways
scom01120
Microbial metabolism in diverse environments
scom01230
Biosynthesis of amino acids
Module
scom_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
scom00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PYG29_03320 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scom01002
]
PYG29_03320 (dapE)
Enzymes [BR:
scom01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PYG29_03320 (dapE)
Peptidases and inhibitors [BR:
scom01002
]
Metallo peptidases
Family M20
PYG29_03320 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
CRISPR_Cse2
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WMY92406
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Position
708778..709935
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AA seq
385 aa
AA seq
DB search
MIMEIETLKLAKALIAQPSVTPDDHGCQSLLISRLTALGFRIESLRFGETDNFYAVYGEK
GPLVCFAGHTDVVPAGDESCWTSPPFTPTERDGRLYGRGAADMKSSIAAFVTACERLLAL
QPDLPLRLALLITSDEEGDGHNGTKRVVELLQQRGEQIDYCIVGEPTAVDTLGDMIKNGR
RGSLSGTLRVHGRQGHVAYPHLAANPVHLAAAALAELTATHWDDGNAYFPPTGFQISNIH
AGTGATNVIPAELAVQFNFRFSTESSAESLRQRVHAILDKHGLRYDLDWALSGQPFLTAA
GRLTTVAQTAIYRVCKVAAQLSTTGGTSDGRFIKAIASELIELGPVNATIHQIDECVDIA
AIAQLSAIYEDMLQQLAQPDSCQSA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgataatggaaatagaaacactgaaattggccaaagctttgattgcacagccgtctgtc
acgccagatgatcatggttgccagtcactgctgataagtcggctaacagcattgggtttt
cgcattgagtccctgcggtttggggagactgataatttttatgcggtttatggcgaaaag
gggccattggtatgctttgccggccatactgatgtggtgccagccggagatgaaagttgc
tggacttctccaccattcacgcctacagagcgtgatggtcggctatatggtcgtggtgct
gccgatatgaaaagcagtattgctgcttttgtcactgcatgtgagcgcttgctggcacta
cagccggatttaccactgcgtctggctctgctgattacttcagatgaagagggcgacgga
cacaatggcaccaaacgcgtggtcgagcttctgcaacaacgtggtgaacaaattgattat
tgtattgtaggcgagcctactgctgttgatacgctgggagatatgataaaaaatggacgg
cgtggttcgttatccggcacgttgcgggtacacggccgtcagggacatgtggcttatccg
catctggctgctaatcctgttcatttagccgcagcggcactggctgagctaaccgccacg
cattgggatgacggcaatgcttattttccgcctactggattccagatttccaatattcat
gcaggtactggtgcaactaatgttattccagccgagttagcggtgcaatttaatttccgt
ttttcaacagaatcaagtgcggagagtttgcgccagcgtgtacatgccattctggataag
catggtttacgctatgatttggactgggcattgtcgggacaaccatttctgactgcagca
gggcgtttaaccactgtcgcccagactgctatttaccgtgtatgcaaggtggctgcacag
ctatctactactggtggtacttctgatggtcgctttattaaagccattgccagtgagctg
attgaattggggccagtgaatgcaactatccatcagatagatgaatgtgtggatattgct
gccatagcacagttatcggcgatttatgaagatatgctgcaacagcttgcccagcctgat
tcctgccaatctgcatga
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